UFO04632.5prime Sequence
1123 bp (980 high quality bases) assembled on 2009-06-30
> UFO04632.5prime
CAGTCGACATGTTTTGGAATATGTTTTCGAGGTTCCTCCGTGGTTCGTCC
ACCTCTCAAATTACGTGTTTAGTGCGGGGTGGTGGCTGCAATTCGAACAC
ATCCCAATCCCAGCCACACCGCAATGTGAGTCTTTTCACAGGAAGACAAC
CCCACTGGAAACTCCGCGTGATGCAGTTTCTCAGTGGCCTGCGACACCGG
TACTGCCTGTGGCGCCTCCGCCGCCTGCTGGGCGTGGCCTTCGACGAGGG
CGGATTCCATGAGGGCACTCGCCAGGCGGCGGTCACCATGATCGATGCAG
TGCGCCAGGCGGACTGGCCCTGCATCCGGAGTTGCTGCACGGAGCGGGGA
TCGGCCGACATCTACGGCTTGTCCCAGATGAGGAGTCCCTACTGCAGTTT
GGTTCGCTTTCAGAAGGAACACCTGCGGCATGCTCTTCCCGTGAGGGTGG
TGCGTCGCTGGATCGATGGTCGCTACTATGTCATGGTGGACATGCTCTTT
GTCGGCCTGCGCAACCTCCTCGATCTCGGAACGGAGCAGGAAAAGGAGGA
AATGCTCCAGCGGATTCAGAGCGTTCTGGTGAACTCCCAGATCGATGATA
AGTTCGAACCGAGCAACTGCCGCCTGGCCATTGCCGAAATAGTGCTCACC
TTCTCTATGGAACTGGGCGATCCCCAGGATCCTCGGGATATAGAAAGTGA
AGATCAGGACAGTGGCTGGCTGGTGGACTCCTACAAGGTGCAGCGCTTCA
AGCTGATCAGCTTCAGTCCGAAAACACTGAACCTTCGCGTTATTGACTTT
CTGAAACCGGTTCGACAGAAGGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
CACAACTAGGCCTAGGAGATCCTGGTCATGGCTAGTGCTGGGATTCTCAC
CAATAAAAACGCCCCGGCGGCAACCGAGCGTTCTGAACAAATTCAGATGG
AGGTTCTGAGGGTCATTACTGGATCTATCAACAGGAGTCCAGCGAGCTCG
ATATCAATAACTCGCTGCAGTCATCCAGTACTGTTGTAATTCATTAAGCA
TCTGCCGACTGAGCCATCACAAC
UFO04632.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9863-RB | 1134 | CG9863-RB | 22..834 | 9..821 | 4050 | 99.9 | Plus |
| CG3502-RB | 3171 | CG3502-RB | 174..345 | 821..650 | 860 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23346656..23347468 | 9..821 | 4050 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:49:22 has no hits.
UFO04632.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:42 Download gff for
UFO04632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9863-RB | 14..838 | 1..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:15:02 Download gff for
UFO04632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9863-RB | 14..838 | 1..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:03 Download gff for
UFO04632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9863-RB | 14..838 | 1..827 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:03 Download gff for
UFO04632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23346648..23347472 | 1..827 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:15:02 Download gff for
UFO04632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19234171..19234995 | 1..827 | 99 | == | Plus |
