Clone UFO04633 Report

Search the DGRC for UFO04633

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:46
Well:33
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG15296-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO04633.5prime Sequence

416 bp (-109 high quality bases) assembled on 2009-06-22

> UFO04633.5prime
CAGTCTCCCTTTTTACTACACTGATGTATCGAACTGCAGCGGTCTCGATG
ACCGTCTACATAACCAATCATTTTGGAGTTTGGGGTAAGACAGAGGAGAC
GGACCACCTGCTCGATCAGATCACCAATGGTCTTCAACCAGTATTTGGAC
TTCTGCGACGAACGCTGAAGTTAGATGAGAGCGATCTGAGCGTGGGTGAG
CTATCCCGGAAATACTACAATGAAGGAGTGAAGGGCACTTTTCGTATTAT
TCGAAACATACCCAACTATTCGGAGGAATTGGCCGACGGTGCCAAGGTCA
CCTGTCTGGATTTGGTGGAAAAGGCCAAGGAATTGCGTCACACCCCAATA
TTCTTGGGGGTGGAATAATTCCACAAATAAGGAGCAACTGATTATTGATT
CACCAAATTCTGCATC

UFO04633.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG15296-RB 686 CG15296-RB 43..444 12..414 1780 96.3 Plus
CG15296-RA 690 CG15296-RA 47..448 12..414 1780 96.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10566084..10566485 414..12 1755 96.3 Minus
Blast to na_te.dros performed on 2014-11-28 23:30:47 has no hits.

UFO04633.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:43 Download gff for UFO04633.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15296-RA 15..418 12..416 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:34 Download gff for UFO04633.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15296-RA 47..450 12..416 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:25 Download gff for UFO04633.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15296-RA 47..450 12..416 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:25 Download gff for UFO04633.5prime
Subject Subject Range Query Range Percent Splice Strand
X 10566082..10566485 12..416 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:34 Download gff for UFO04633.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10460115..10460518 12..416 96   Minus