UFO04633.5prime Sequence
416 bp (-109 high quality bases) assembled on 2009-06-22
> UFO04633.5prime
CAGTCTCCCTTTTTACTACACTGATGTATCGAACTGCAGCGGTCTCGATG
ACCGTCTACATAACCAATCATTTTGGAGTTTGGGGTAAGACAGAGGAGAC
GGACCACCTGCTCGATCAGATCACCAATGGTCTTCAACCAGTATTTGGAC
TTCTGCGACGAACGCTGAAGTTAGATGAGAGCGATCTGAGCGTGGGTGAG
CTATCCCGGAAATACTACAATGAAGGAGTGAAGGGCACTTTTCGTATTAT
TCGAAACATACCCAACTATTCGGAGGAATTGGCCGACGGTGCCAAGGTCA
CCTGTCTGGATTTGGTGGAAAAGGCCAAGGAATTGCGTCACACCCCAATA
TTCTTGGGGGTGGAATAATTCCACAAATAAGGAGCAACTGATTATTGATT
CACCAAATTCTGCATC
UFO04633.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15296-RB | 686 | CG15296-RB | 43..444 | 12..414 | 1780 | 96.3 | Plus |
CG15296-RA | 690 | CG15296-RA | 47..448 | 12..414 | 1780 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10566084..10566485 | 414..12 | 1755 | 96.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:30:47 has no hits.
UFO04633.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:43 Download gff for
UFO04633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15296-RA | 15..418 | 12..416 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:34 Download gff for
UFO04633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15296-RA | 47..450 | 12..416 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:25 Download gff for
UFO04633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15296-RA | 47..450 | 12..416 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:25 Download gff for
UFO04633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10566082..10566485 | 12..416 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:34 Download gff for
UFO04633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10460115..10460518 | 12..416 | 96 | | Minus |