UFO04635.5prime Sequence
1098 bp (1028 high quality bases) assembled on 2009-06-30
> UFO04635.5prime
CAGTCGACATGTCGAATACCAGTCGTCGCGATATTTGGGTGCCCAGTCCC
GCCATTATACTGCATCAGATGCAATCCAACGAGGATGTGTCCGATGAATC
AACTCTGGAATACCATGAGGAATCCAACCAGGCGTGGCGCGAACAGTATA
TGGCCAAAAACGTGGCCAGAATGGGAGTCGGTTTCGAGTTCGTGAACTCA
ACCTCTCGCTACATGAGCTCCTTGAGCAGCACCCAGGATGACGATACAGA
GAACCACGTGATTGGTAATTCATCTTCCAGCACCACCTATCGAGTGGGGC
CCACCATCCGAATCCCCCGTCTCGAAATTCAGTCTTACAGTTCCGGGTCG
GATGACGAGAACCTGATCCAGCACCTGGCGGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATA
ATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGA
TTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATC
CAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCG
AGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTG
TAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGAT
GAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATAT
TTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTT
TAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACA
TATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTACACG
CCACATCTTGCGAATATATGTGTAGAACTGCCGGAAATCGTCGTGTATTC
ACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTACA
GGTGACACTATCCATATCACAGCTCACCGTCTTTTCATGCAAACGAATCG
GATGAACATTCATCAGGCGGCAGGATGTCAATAAGGCGATGCTTGGCT
UFO04635.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13039-RA | 706 | CG13039-RA | 81..453 | 8..380 | 1865 | 100 | Plus |
| CG13040-RB | 1419 | CG13040-RB | 76..333 | 8..265 | 1290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16326310..16326682 | 380..8 | 1865 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:58:25 has no hits.
UFO04635.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:33:17 Download gff for
UFO04635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13039-RA | 81..456 | 8..384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:57:35 Download gff for
UFO04635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13039-RA | 81..456 | 8..384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:31 Download gff for
UFO04635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13039-RA | 81..456 | 8..384 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:31 Download gff for
UFO04635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16326310..16326682 | 8..380 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:57:35 Download gff for
UFO04635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16319410..16319782 | 8..380 | 100 | | Minus |
