UFO04636.5prime Sequence
1092 bp (979 high quality bases) assembled on 2009-06-30
> UFO04636.5prime
CAGTCGACATGATAATAATGTCTGATTCGAAAGCGGAGTACAACTGGGGC
GATTTGGGTGTGGAGTCGATGGAGAGCTTTGCATCCGCAATAAGTGAGGA
GTTTCCCAGACTCCAACAGCATCGTGAGCAGGTGGAGCAGCTGCAGCGAC
GCGGCAGGCAGATTGTCAGCCAGGCCCAGCAGCATTCTCAGGTTTTGGTC
TCCAATCTGTTCAAGAATATGAAGATCTCGTGCGAGAAGCCCACATTTCC
ACCGCAGGTGTCGGCTCCAAAGGCCTATCGCTTCAAGGACATCTATTCCA
GTCGCAAGGATCAGCTGATCCGCGAATGCAGGGAGCAGGAGCGCAAGCAG
CGCGAGTTCCACAGCCGACCGATGCCCGACTTTCGTCAGGCGCACTCACG
TCAGTCCTCCAGGGTCGTTGTGCATCGGATCACCTGCCCCACGACCCCCA
ATGTGCTCAAGAATTCGCGTGAAATGGAGGAAAAGCGCCGCTTGCGGGTG
GAGCAGCTGCAGAGGGAGCGCGAGCTGGAGTCCCAACTTCACAAAATGCA
GGCTCCTAGGGCCAAACCGATTCCGCAGAGCAGCCGTCAGCCCTTGAAGT
CCTCGAACCGACCTTCCTCCGCAGTTCCAGCGGCAAGGGTGAAGGTCGAG
CCCTTCAACTTGTCCGCCGAATCGCGCGTCCAGCAGCGGCGCATTTTCAA
CATCCAGACGTCCAAGGCGCAGGAGGCGCGGCGCCGCGAGCTGGAGGATC
AGCGCCAACGGGCGGAACGGGAGGCCTACCAAAAGCTGCGCCAACGAACC
ACGTTCCGCGCCAGACCCAATCCATTTTCGCAGACCGCACGTGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACATAAAAAACGCCGGCGCACCCGAGCGTTCTGA
ACAATCCGATGGAGTCTGAGTCATACTGAATCTATCACAGGAGTCAGCGA
GCTCGATTCCATACGCCCCGCCTGGCCACTCATCCGAACTGT
UFO04636.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15395-RB | 1234 | CG15395-RB | 165..998 | 9..842 | 4170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2610476..2611047 | 271..842 | 2860 | 100 | Plus |
| 2L | 23513712 | 2L | 2610158..2610422 | 9..273 | 1325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:29:24 has no hits.
UFO04636.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:33:18 Download gff for
UFO04636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15395-RB | 3..852 | 1..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:39 Download gff for
UFO04636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15395-RB | 155..1004 | 1..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:37 Download gff for
UFO04636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15395-RB | 155..1004 | 1..849 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:37 Download gff for
UFO04636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2610148..2610421 | 1..272 | 98 | -> | Plus |
| 2L | 2610478..2611053 | 273..849 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:39 Download gff for
UFO04636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2610148..2610421 | 1..272 | 98 | -> | Plus |
| arm_2L | 2610478..2611053 | 273..849 | 99 | == | Plus |
