UFO04641.5prime Sequence
737 bp (638 high quality bases) assembled on 2009-06-30
> UFO04641.5prime
CAGTCGACATGAGGAAAATCATGAAGCAGGGCAAGATCGTAATCGTCCTT
AGCGGACGTTACGCCGGTCGCAAGGCCATCATCGTCAAGACCCACGACGA
TGGAACCCCGGAGAAGCCCTTCGGACACGCCCTCGTCGCCGGTATCGATC
GCTACCCGCGCAAGGTGACCAAGAAGATGGGCAAGAACAAGCTGAAGAAG
AAGTCCAAGGTCAAGCCCTTCCTGAAGAGCCTGAACTACAATCATCTGAT
GCCCACCCGCTACACGGCGCACGACATCAGCTTTGAGAAGCTGTCGCCCA
AGGACCTGAAGGATCCCGTAAAGCGCAAGACGCACCGCTTCCAGACCCGC
GTCAAGTTCGAGTCCGTCTACAAGGAGGGCAAGAACAAGTGGTTCTTCCA
GAAGCTGCGTTTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCC
AGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAG
CCTAGAGATCCTGGTCATGACTAGTGCTTGTATTCTCACCAATAAAAAAC
GCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGAGTTCTGAGTCA
TTACTGATTTATCACAGAGTCCAAGCGAGCTCGATTATCAAATTACGCCC
CGCCCTGCCCCTCATCGCAGTACTTGTTGTAATCATTAGCATTCTGCGAC
TGAGCCATCCCGACCGCATGATGACTGATCGCCAGCG
UFO04641.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL27-RD | 987 | CG4759-RD | 108..512 | 9..413 | 2025 | 100 | Plus |
RpL27-RC | 544 | CG4759-RC | 49..453 | 9..413 | 2025 | 100 | Plus |
RpL27-RB | 603 | CG4759-RB | 108..512 | 9..413 | 2025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25684098..25684502 | 413..9 | 2025 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:28:30 has no hits.
UFO04641.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:47 Download gff for
UFO04641.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL27-RA | 74..492 | 1..420 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:59 Download gff for
UFO04641.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL27-RB | 100..518 | 1..420 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:00 Download gff for
UFO04641.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL27-RB | 100..518 | 1..420 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:00 Download gff for
UFO04641.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25684092..25684509 | 1..420 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:59 Download gff for
UFO04641.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21509814..21510231 | 1..420 | 98 | | Minus |