UFO04647.5prime Sequence
1098 bp (993 high quality bases) assembled on 2009-06-30
> UFO04647.5prime
CAGTCGACATGAATTTGGAGTTCTTCACCGAGGGCCTCGACTGCCTAATG
TACTGCGGCATGAAGCTGTCGCCGGAGCAGCGCATCTTGATTGAAAACTC
GCTGATCGCTTTACAAAATGACAATCGTTTTACGGGCATGTATCTTTGGG
GTCGCATTACGGCCACCAAGAACGATTACTACATTGCCTTTGGCTACACT
AATGACTGTCTCAAGGATCGCAAGTATTTCTACAGTCTGGACCAGTTCCA
ATGGCAGTTGCTGCCGTTCGTACAGAGCCCCAAGATATTTCAGGCGACTA
TATTGGCAAGGGAGCCATTTATAGGAGATCCCAGCCTGATGACCTACGTT
AAGCTGGACCCCACTTTTGACATCGTAGGCAATCAGGTGGCTGGTATCAG
CCGCCCTGAAGTGGTCAAGCTTAAGGAGGAGGAACGGCTGGCAGCCATTG
TGTTTATTATAACAGAGGAGTGTGCCATTTGCCCACGCGGAGCCTTTTAC
AAGATGACCGATGGTCGTGTTATACCCAACCAGATGTTTCGTGGACTGAA
TGACTTGCAGATCGACAACCAATCATATTACCAGCTCTATCGCCTGCCCC
GCAATGATCTCAAAGTCAATTTGGCCAAGAGGAGCGACTATAACTATGCT
ATTGACTTTCTGGACACCATTGACTGCGTAATACCACTGTGTCAGGCTTT
TGCCCTGAATATGCAACGGAACGAGGGTTTGGTAATAATCAAGTCGTGCC
TTTGGTTGGGCATGACATTCTTTCACAAAATCAACTCCCACAAGCATGGT
TTCCTTTACTTGGGCGATGGCAAGAAGAACTTTGACTTGCTTTTCATGTA
TGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTC
ATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCC
TGGTCATGACTAGTGCTTGGATCTCACCAATAAAAAAACGCCCGGCGCAA
CCGAGCGTTCTGAACAATTCCGATGGGAGTTCTGAGGTCATACTGGATCT
ATCCACAGGAGTCAAGCGAGCTCGAATTCAATACGCCCCGCCTGCACT
UFO04647.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31803-RA | 929 | CG31803-RA | 42..889 | 4..851 | 4225 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17411689..17412184 | 851..356 | 2480 | 100 | Minus |
| 2L | 23513712 | 2L | 17412239..17412592 | 357..4 | 1755 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:28:25 has no hits.
UFO04647.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:44 Download gff for
UFO04647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31803-RA | 39..899 | 1..862 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:54 Download gff for
UFO04647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31803-RA | 39..899 | 1..862 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:55 Download gff for
UFO04647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31803-RA | 39..899 | 1..862 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:55 Download gff for
UFO04647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17411679..17412183 | 357..862 | 99 | <- | Minus |
| 2L | 17412240..17412595 | 1..356 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:54 Download gff for
UFO04647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17411679..17412183 | 357..862 | 99 | <- | Minus |
| arm_2L | 17412240..17412595 | 1..356 | 99 | | Minus |
