UFO04649.5prime Sequence
1117 bp (1001 high quality bases) assembled on 2009-06-30
> UFO04649.5prime
CAGTCGACATGTCGGCGGAAGAGGCGGGTTCTAGGCAGTGCTCTTTTCAG
CCAGTTACCCATTGCATTTTCGAACTCGATGGTCTGCTGATAGACAGCGA
GCGTTTGAGAACGGAAACCGTTCAAAGGATTCTGGATCCCTATGGTCACA
CGTATAGCTTCGATCTGAAGATGCGGTGCATGGGAAAGCCAGATTCCGAG
CAGGCTGCTCTAATCGTAAACACCTTCAATCTGCCCTTCAGCATGACGGA
GTTTGAGAACCAGCAGGAACTTCAGTGTCGTGGCAAAATGGGATTCATTC
GACTGATGCCCGGTGTGGAGCGTCTGCTGCATCACCTCAAAGCGTTCAAC
ATTCCCATGGCTATCGCAAGTGGCTGCTGTCGGGATTCGTTTAGGATAAA
GACGCGTCGGCACTCCAGGCCCTTCGATGTCTTCCACCACGTGGTTTTGA
GCGGCTCCGACGAAGAAGTCAAGAGGGGGAAACCCGCTCCGGATGTTTTC
CTCACCACCGCCTCTCGTTTTGAGGAATCGCCGGAGCCGAGCAAGTGTCT
GGTCTTCGAGTCCTCTTTGGTTGGTATGGAGGCTGCTCTGTCCGCTGGCA
TGCAGGTGGTCCTCGTGCCCGATCCTCTGGTATCCTTTCGAGCAAGTGCT
CACGCCACTTTGAGACTGCGATCGCTGGAAGGATTCAAGCCACAATATTT
TGGACTGCCACCTTTGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAA
TTACGCCCCGCCCTGCCACTCATCGCAGTACTGATGTATTCATTAAGCAT
TCTGCGACATGCAGCATCACAAACGGCATGATGACCTGATCGCAGCGCAT
CAGCACTTGTCGCCTGGCTATAATATTTGCCATGGGTGAAAACGGGGGCG
AAAATGTCATAGTGTCA
UFO04649.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31924-RB | 819 | CG31924-RB | 29..736 | 9..716 | 3540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1354184..1354891 | 716..9 | 3540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:31:30 has no hits.
UFO04649.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:33:31 Download gff for
UFO04649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31924-RB | 29..736 | 9..716 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:06 Download gff for
UFO04649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31924-RB | 29..736 | 9..716 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:50 Download gff for
UFO04649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31924-RB | 29..736 | 9..716 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:50 Download gff for
UFO04649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1354184..1354891 | 9..716 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:06 Download gff for
UFO04649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1354184..1354891 | 9..716 | 100 | | Minus |
