UFO04651.5prime Sequence
1156 bp (1052 high quality bases) assembled on 2009-06-30
> UFO04651.5prime
CAGTCGACATGGCGGATGCAAAAGAGCAACCAGAATGGGGCATAAAGCTC
TCAAAATTCTTTGTATTACCCCAACGCTGGATTCTGGCCATCATGGGATT
CTTTGCCATCTTTAATGCATACACCATGCGGATATGTCTATCCCAGGCCA
TCACAGTGCTGGTGGTGAAGAGGAATTATACTATTTTCCACACCGAAGCG
ATATGTGAACCGGATGACCAGTCTGATCCCTCGAGCACTTTCGAGGGAGG
CGACTATGATTGGTCGCAGGAGAAACAGGGTCTAATCCTGGCCTCTTTCT
ACATTGGCTATATTGTAACTCATTTGCCTGGTGGAATTCTGGCTGACAAA
TTTGGCGGAAAGTGGACACTGAGTCTTGGAATCTTTTTTACGGCTATTTT
TACATTGCTGACACCCGTCTGCATTGTTTATGGCGGTGCCGATGCATTAA
TTGTCCTCCGCGTACTTATGGGACTCGGTGAAGGAACCACTTTCCCCGCA
CTCAGCGTTTTGCTAGCCAGCTGGGTACCGGCAAACGAGCGAGGAATGCT
GGGAGCCCTTGTACTCGGCGGTGGTCAGATGGGTAGCATTGCTGGTAACA
TTATTTCTGGCTATGTACTCAGCTCCATGGACTGGCCATGGGTATTCTAT
GTTTTTGCGATCATCGCCCTTGTCTGGTTTGTCGTTTTCACGCTAGTGTG
CTTTAGCAGTCCATTCACTCATCCATATATCAAGCCAGAGGAACGTGCGT
TCTTGGCACAGGAGGTACCGCCGCCGGATAAGAACAAGCCGAAGACACCA
TTTTTTGCCATATTAACAAGCATACCCATGTGGGCATTGATCAGTGCTCA
AATCGGACACGATTGGGGTTTCTATATTATGGTCTCCTACCTGCCAAGTA
TATGTCGGATGTGCTGCGGTTTCGATTAAGTCGAATGGTCTCTACTCCTC
ACTGCCCTACGTTACCATGTGGATCATGTCGCTGCCTCAGCGGCTGGGTG
GCCGATCAAATGATCAAACGCAACTTGCATGAACACACCAAACCCCCGCA
AAATATTGACAGGAGTGCCCGCCTTTGGGACCGCTTCTCTATGTAGCTGC
ATCCTATTCTGGATGCAATCGAGGCCAGCCGTTGCTCTATCCAATACCAT
GGCTGA
UFO04651.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:50:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9254-RA | 1684 | CG9254-RA | 190..1324 | 9..1140 | 5240 | 97.9 | Plus |
| dmGlut-RA | 2426 | CG5304-RA | 357..502 | 30..175 | 280 | 79.5 | Plus |
| dmGlut-RA | 2426 | CG5304-RA | 1185..1304 | 858..975 | 190 | 78.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:50:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13595879..13596997 | 1125..9 | 5080 | 98.1 | Minus |
| 2L | 23513712 | 2L | 12031902..12032010 | 67..175 | 275 | 83.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:50:46 has no hits.
UFO04651.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:08 Download gff for
UFO04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9254-RA | 183..1324 | 1..1140 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:01 Download gff for
UFO04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9254-RA | 183..1324 | 1..1140 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:36 Download gff for
UFO04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9254-RA | 183..1324 | 1..1140 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:36 Download gff for
UFO04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13595867..13597004 | 1..1136 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:01 Download gff for
UFO04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13595867..13597004 | 1..1136 | 97 | | Minus |
