UFO04652.5prime Sequence
1106 bp (1017 high quality bases) assembled on 2009-06-30
> UFO04652.5prime
CAGTCGACATGAGGACGTCATCACCAGCACTTAAATACCTATTGGAGAAG
GATGTTCAGGTGTCGAAGCATTTCGTAGTAGCCGTCTCCAATCTGTCGTT
CTTCAAATCCCTGCGGATCCACAGCAGATTTCTGGAGATATCATGCGATG
GAATCGCCTGGTTTGTCTCATGGATCGCCTTCATCTGGTTGCTCAGCTCA
AAGAGCTTGTATCAAATGCAAGTCAATATGCTCTTCGGCCTGATACTCGA
CGTGGTGATCGTGGCCGTGCTGAAGGCGCTGGTTCGTCGCAGGCGACCCG
TGGCCAGCAAGGATATGCTGACCATTGGACCCGATAAGTTCAGCTTTCCC
TCAGGTCATGCCTCCCGGGCGTTCTTTGTGCTCCTGTTCTTCGCCAAGCT
GTACCCGCTCCACATCATATTCCTAATGCCGGTCACAGCTTGGGCTGTAA
GCGTGGCCATCTCACGGCTCATCCTCCAGCGTCATTATATTTTGGATATC
TGCGCCGGTGCTGCCATCGGAGTGTTGGAGGCACTAATCGTGGGACTTCT
GTGGATCAGCGAGGAAACTGCATTTAGCATTGTGGGCTTTGTTACCGAGG
AAACTGTCGACAGCATGGAGGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGT
TCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATAT
CAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTA
AGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGATC
GCAGCGGCATCAGCACTTGTCGCTTGCGTATATATTTGCCCATGTGAAAC
GGGGGCGAAGAGTGTCATATGCACGTTTAATCAACTGTGAACTCACCCAG
ATGCTGAAACGAAACATTTTCTCAATAACCGTAGAATGCAGTTCCGGTAA
CGCACT
UFO04652.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31717-RB | 854 | CG31717-RB | 23..638 | 5..620 | 2945 | 98.5 | Plus |
| CG31717-RA | 790 | CG31717-RA | 79..694 | 5..620 | 2945 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10250895..10251498 | 17..620 | 2900 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:37:54 has no hits.
UFO04652.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:33:32 Download gff for
UFO04652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31717-RA | 76..697 | 1..624 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:29 Download gff for
UFO04652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31717-RA | 76..697 | 1..624 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:57 Download gff for
UFO04652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31717-RA | 76..697 | 1..624 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:57 Download gff for
UFO04652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10250895..10251501 | 17..624 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:29 Download gff for
UFO04652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10250895..10251501 | 17..624 | 98 | == | Plus |
