UFO04656.5prime Sequence
618 bp (277 high quality bases) assembled on 2009-06-30
> UFO04656.5prime
CAGTCGACATGAACTGCATATTTCTTATGTGCTCCCTGCTTGGCATCTCT
TTCGCTATAGTGATCGAGGCCAACTGTCTGCGGGGTACAGGCCACATGTG
GCAGCAGAAGCCACCCACCAGCACAAACAGTTGCAATCGACCGTTATCTC
TGGCTAGAAATGGAACATCAATGGGAAAACGAGCAACGTCTGCAGTCGAC
ATTCCAGTAGCTACAATGGGAGCACCACGTCCGGAGGTTGAAGCAACCTT
ACCTGCTCCTCCTGCGGTGTTTCTGGCCAACTACGTCTATGAGTGCGCCA
TTCATCGCACTGCAAACCTTGCAGCAGACCACCAGGGTCGGAGCCGGAAT
CGAAACCGGAACTTGAATCCGGACCGGAGGTGCCTAAACCCCGAACTGTG
ACACTGGCAGCCGGCAAACTGGAAGGGTTCGGGACAACTGATGCAAGATG
TCTAGAACATTCGTTTGGCCCGCGAGCCCAGGGAAGTGGACATAATCATA
AGCCTTGGTGATAGTCATAATCTGAACTAGCCTACGAGATCCTGCGCGCG
AGAGTGCTGGGAGTCGCGCCATTAAAAAACATCCGGGGGCAACCGAGCGT
GCTGAACAAATCCGGATG
UFO04656.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31093-RA | 585 | CG31093-RA | 17..450 | 9..441 | 2025 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25789954..25790342 | 441..54 | 1775 | 97.7 | Minus |
3R | 32079331 | 3R | 25790410..25790455 | 54..9 | 230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:55:10 has no hits.
UFO04656.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:09 Download gff for
UFO04656.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31093-RA | 17..461 | 9..451 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:02 Download gff for
UFO04656.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31093-RA | 17..461 | 9..451 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:34:20 Download gff for
UFO04656.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31093-RA | 17..461 | 9..451 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:34:20 Download gff for
UFO04656.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25789943..25790341 | 55..451 | 96 | <- | Minus |
3R | 25790410..25790455 | 9..54 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:02 Download gff for
UFO04656.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21615665..21616063 | 55..451 | 96 | <- | Minus |
arm_3R | 21616132..21616177 | 9..54 | 100 | | Minus |