UFO04658.5prime Sequence
1136 bp (1046 high quality bases) assembled on 2009-06-30
> UFO04658.5prime
CAGTCGACATGTCGGACTACTCAAAGTTTCTGTCCAACTTGACGGATCAG
CTGGCACTTCTGCCTAAAGTTGCGCCCAAAGGATTGGGACGATTGGGCAG
CCTGGAGAACTTGGGCAATAATCTGGGCAATCTGCGCCCCGCCCACAAGG
CTCTGATGTGCGTGGGCGTGGCCACTGTGGCTTGCGTTGTCCTCGGCTTC
ACTGTTAAGTCATTAAAGGGACATAGCCGCAAGGACAAGCAAAGGATCAT
CAATGTACGAATCGGTAATCCGATCAAGCGGGAACTCGAGGGGGCTGATA
AGGACGAAGGATCCTTTGGGAAGGAAGAAGAACTCAATGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCA
TAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAG
TGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTG
AACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAG
TCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAG
TACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAAC
GGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCG
TATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTG
GCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGGCTGAGA
CGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCA
CCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGGAAAT
CGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGG
AAAACGGTGTACAAGGGTGACACTATCCCATATCACAGCTCACGTCTTTC
ATGCATACGAAATCGGATGAGCATTCATCAGGCGGGCAGATGGTGAATTA
AGCCGGATAAAACCTGGGCTTATTTTTCTTACGGTCTTTAAAAGGCCGTA
TATCACTGAACGGCTTGTTAAGGTACTGGAGCAACG
UFO04658.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13021-RB | 611 | CG13021-RB | 114..443 | 9..338 | 1650 | 100 | Plus |
| CG13021-RA | 597 | CG13021-RA | 100..429 | 9..338 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3515260..3515589 | 9..338 | 1650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:58:54 has no hits.
UFO04658.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:33:26 Download gff for
UFO04658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13021-RC | 326..666 | 1..338 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:57:52 Download gff for
UFO04658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13021-RA | 91..429 | 1..338 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:45 Download gff for
UFO04658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13021-RA | 91..429 | 1..338 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:34:45 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:57:52 has no hits.
