UFO04659.5prime Sequence
1087 bp (906 high quality bases) assembled on 2009-06-30
> UFO04659.5prime
CAGTCGACATGTCCAACGTTATTAAGAAGGTGATTCCCATGCTGGACCGC
ATTCTAATCCAGCGTTTCGAGGTGAAGACCACCACCGCGGGCGGCATCCT
GCTGCCCGAGGAGTCGGTGCCCAAGGAGATGCAGGGCGTGGTGGTTGCCG
TCGGACCCGGAGCCCGCAATCCTGCTGGAGCTGGACACTTGTCCGTTGGC
GTCAAGGAGGGCGATCGCGTGCTGTTGCCCAAATACGGTGGAACTAAGGT
CGATATGGACGACAAGCGCGAGTATGTTCTGTTCCGCGAGAGCGATATCC
TTGCTAAACTGGAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCC
CAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTA
GCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAA
ACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAG
GTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATT
ACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATT
CTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAG
CGGCATCGGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAA
CGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTG
AAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCC
TTTAGGGAAATACGCCAGGTTTTCACCGCACACGCCACATCTTGCGAATA
TATGTGTAGAAGCTGCCGGGAAATCGTCGTGGTGATTCACTCCAGAGCGA
TGAAAACGTTTCAGTTTTGCTCATGGTAAACGGTGTACCGAGGGTGAACA
CTTTCCCAGTATCACCAGCTTCACGTCTTTTCATTGCCATAGCGAATTTC
CCGGATGACGATTCATTCTGGCGGGCAAAAATGTTGAATAAAGGCCGAAT
AACTTGGTGCGTATTTTTTCTATACGTCTTCAAAAAG
UFO04659.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:50:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9920-RA | 714 | CG9920-RA | 102..407 | 9..314 | 1530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:50:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14097600..14097905 | 314..9 | 1530 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:50:38 has no hits.
UFO04659.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:07 Download gff for
UFO04659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9920-RA | 102..414 | 9..323 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:56 Download gff for
UFO04659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9920-RA | 102..414 | 9..323 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:32 Download gff for
UFO04659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9920-RA | 102..414 | 9..323 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:32 Download gff for
UFO04659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14097600..14097905 | 9..314 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:56 Download gff for
UFO04659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9923322..9923627 | 9..314 | 100 | | Minus |
