UFO04662.5prime Sequence
1132 bp (1018 high quality bases) assembled on 2009-06-30
> UFO04662.5prime
CAGTCGACATGAGCAGGCCAAATCCCACGCCACGTTCATCGACGGGTCTA
CGCAAACCGACTGGTCAAAGATCAACACCTCCACCCAGGCCACCACCTCA
TGTTCCCGCTCCTGCTCCACCACCGCATGAGCCTGCGAAACCATATGGAG
AATCCCCGGGCCTGCTGAGCCCGGTCGCATCGTCGGGTCCTTTGCGCCAA
CGCTCTTCTGTGCACCTGAGGAAGAAACACCTCGGTTGGGTCTACTTGAT
CCACGCGGTTCTATCGGCAAGTGCAGTAATTCAGCTTGTGGTCCTGCGGC
TCTGCAATAAGGACTTCGGGGAGCTAATTAGCCCATCGGTGCCCAGCTTC
GTGTGGCTGCTCCTGGCCGTGGGATGTGTGCTGATCATGGCCTACGTGTA
CCTGGCCAACCAGTGTCCGTGCAATGGTCTGCTGGCCATTGTCATCGTGG
AGGTGATAGTGATATTTGTGAATTGCCACCGGTGGGCGCGTCTATCGATG
CTCTGGATGACTGGTGTCCTGTCACTCGTGCTGGCCCTGAACGTCATGCT
CTACTTGATGGGCGTCTATCTGCCGCTGAAAATACTGCCCGGTAGCATCT
TCATGATCGTCCTCACATTCTGTTGCATAGCGATTGTCGTTTCGATCTAC
TTGATTGTGTATCTAAACGGCAATCGCTATATAATGCGATACGTCTCGAT
GGTCAGTCTGATCTACGTGGCTAGTCTCATCCTCTTCACCATCACCGTTA
TCCACCAGCGAAGATTTGAGCATACGGATCGCACCGAATATGTCCTGCAC
GCCACCGTTCTGGCCATGCTGTTCGTCTATATGATTCACCCACTCTCAAC
TATGGTGCGATTTGGGCAGTTTTGGTGGACCATGTAGCAAGCTTTCTAGA
CCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATATCATAA
TCATAATCATAATCACACTAGCCTAGAAATCCTGGTCATGACTAGTGCTT
GGATTCTCACCAATAAAAACGCCCGGCGGCAACGAGCGTTCTGAACATTC
GATGGGAGTTCTGAGGTCATTACTGGATCTATCAAGGAGTCAAGCGAGCT
CGAATCAATACGCTCGGCCTTGCCTCACTCGC
UFO04662.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4073-RA | 1104 | CG4073-RA | 134..1012 | 9..886 | 4325 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10714931..10715809 | 9..886 | 4300 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:36:19 has no hits.
UFO04662.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:33:43 Download gff for
UFO04662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4073-RA | 127..1015 | 1..890 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:17 Download gff for
UFO04662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4073-RA | 127..1015 | 1..890 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:39 Download gff for
UFO04662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4073-RA | 127..1015 | 1..890 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:39 Download gff for
UFO04662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10714924..10715812 | 1..890 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:17 Download gff for
UFO04662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6540646..6541534 | 1..890 | 98 | == | Plus |
