UFO04672.5prime Sequence
1037 bp (951 high quality bases) assembled on 2009-06-30
> UFO04672.5prime
CAGTCGACATGCCAATATTCGTGAAAAACCTGCCATGCATTCGCCACCTG
GCCAAGCGGAGTCTAATTGAGGGGCGGCGCTGGATATCGGGCCTAGAGAA
AGGTCAAAACAGCGCAGCCCAAAACGTAAATCCCTGCCACAAGGACTGGC
CCATGAGAGAGGAGTCTTTTGCGGCAGCCCAGCTGCTCCGCCAGAGGCAG
CAGAACCGCCGGTGGAGCAACAACTACTCCGGCCTGGACTCCGCCATGTT
CCGACCAGTTGCCAAACCGGATGAGATGGTGCCCCGCCGCAACAATGTGG
TGGCCGCCCAGAACGCGGCCAGGAGGCGGAACTTCAAGTCGGCGCAGGTG
TCCCAATACCAGCAGAGGCAGGAGGAAGAGCAAAGACTGGACGGCGATCC
AGAAGCCAAGGCCGAGGAGCACGACTACGAGTCGGATCTGGAGGTTCGAT
CGGTACGGGAGACCGTTTTCGGACCGCCGGAGGACAACTCGGAGGAGGAG
ATGGATCGCGCCCGGGCTGAGCAGGAGCTTCTCCAACGCGTGGCCAGCGC
CTCCAAGCAAACGGAACGTTTGCCCGATAGCGCCTCCATTTCCCGAAAGG
TCATCTCGCCATACAACTCCTACCGCAGCCATCGCACCCGCTGGGCGGAG
TTCCGGCACAACATGATCTTTGGCCGTACGAGTTACGCAAGCTTTCTAGA
CCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATA
ATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTG
CTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAA
CAAATCCAGATGGAGTTCTGAGTCATTACTGGATCTATCAACAGAGTCCA
AGCGAGCTCGATATCAATACGCCCGCCCTGCCACTCATCGCAGTACTGTT
GTATCATAGCATCTGCGACATGCAGCCATCACAACCGCATGATGACTGAT
CGCAGCGCATCAGCACCTGTCGCTTGCGTATTATATT
UFO04672.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30376-RA | 941 | CG30376-RA | 134..811 | 9..686 | 3390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8263616..8264293 | 686..9 | 3390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:23:36 has no hits.
UFO04672.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:33:36 Download gff for
UFO04672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-RA | 134..814 | 9..689 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:07 Download gff for
UFO04672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-RA | 134..816 | 9..692 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:52 Download gff for
UFO04672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-RA | 134..816 | 9..692 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:52 Download gff for
UFO04672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8263611..8264293 | 9..692 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:07 Download gff for
UFO04672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4151116..4151798 | 9..692 | 99 | | Minus |
