UFO04691.5prime Sequence
1088 bp (978 high quality bases) assembled on 2009-06-30
> UFO04691.5prime
CAGTCGACATGGTTCTGATGCTTTGCTGCAGCTTCGATCCCTTCTACGTT
GGACCCTGCCCACCCGGCTGCCTGGCTCCTTTGATGGGAGGAACTCCCTA
TTGCGGATGTGGTCCCTGTGGAGGTTGCTGTAGTCCTTGCTGTGGTCCAT
GTGGTCCTTGTGGTGGCTGCAGCTCGTGTCCTTGCGGCTGGGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAG
GAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACA
AACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTT
GCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATA
TTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGA
GACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTT
CACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAA
TCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATG
GAAAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGT
CTTTCATTGCCATACGAAATTCCGGATGAGCATTCATCAGCGGGCAAGAA
TGTGAATAAAGGCCGGATAAAACTTGTGCTTATTTTTTCTTTACGTCTTT
AAAGCCGTATATCCAGCTGAACGGTCTGGTATAGTACATGAGCACTGACT
GAATGCCTCAAAATGTTCTTACGATGCATGGAATATCACGGGGTTATCAT
GAATTTTTCTCATTAGCTTCTAGTCTGAGATCATACTT
UFO04691.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31740-RA | 606 | CG31740-RA | 220..402 | 9..191 | 915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18009308..18009490 | 9..191 | 915 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:55:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 760..827 | 123 | 68.1 | Plus |
UFO04691.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:34:04 Download gff for
UFO04691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31740-RA | 237..433 | 1..197 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:09 Download gff for
UFO04691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31740-RA | 212..408 | 1..197 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:34:26 Download gff for
UFO04691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31740-RA | 212..408 | 1..197 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:34:26 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:46:09 has no hits.
