UFO04694.5prime Sequence
1035 bp (957 high quality bases) assembled on 2009-06-30
> UFO04694.5prime
CAGTCGACATGATTCCCACTAATCTGGGCAGACAGAATGGGGCTCTGGTG
TTGGAAGTGTTGAAGGTGCTGGGTCGCCCGGCGACCAGTTACGAGGTGGC
GGAAAGAGTGGCCGACGTCTACAGGCTGCCGCTGCACCGCATCCGTCCCG
TGGTCACCGACGTCCTGGAGGCAGGATCACGACATGGATTCTTTAGCAGC
CTCAATGGCCATTATTCGGTGGTGCAGCCGGTGGTGGAGCAACTGGGACG
GGATATAGACCAGTATGCAGCCGATATACTGGCGGGATATAGTTGCGAGG
GTTCTCTGCCCAAGATGTCGACCCTGATGCTCAAGCTACAGCAACTGGAC
GGGTCTCCGCCCATGATGACGGGGATCAGGTATCCCCGAGTGAGCTCGGG
GGAGCAACGCGAACACATGCCCTCCGGCGATGTGTCCTTGGACGCCCGTC
TCATGCTGCCCTTTCCTCGAGTACTAGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA
TGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCT
CGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAAT
TCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAAC
CTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCC
CATGGTGAAACGGGGGCGAGAGTGTCCATATTGCCACGTTTAAATCAAAC
TGGTGAACTCACCCACGATGGCTGAGACGAAAAACATATCTCATAACCCT
TAGGAATAGCAAGCTTCACGTACACGCCAATCTGCGAATTATGTGTAGAA
CTGCGAATCGTCTGCATCATCGAGCATGAAACGTC
UFO04694.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31407-RB | 778 | CG31407-RB | 196..663 | 9..476 | 2325 | 99.8 | Plus |
| CG31407-RA | 764 | CG31407-RA | 182..649 | 9..476 | 2325 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10022960..10023427 | 476..9 | 2325 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:30:56 has no hits.
UFO04694.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:54 Download gff for
UFO04694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31407-RA | 174..657 | 1..484 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:41 Download gff for
UFO04694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31407-RA | 174..657 | 1..484 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:31 Download gff for
UFO04694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31407-RA | 174..657 | 1..484 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:31 Download gff for
UFO04694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10022946..10023431 | 1..490 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:41 Download gff for
UFO04694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5848668..5849153 | 1..490 | 97 | | Minus |
