UFO04703.5prime Sequence
1160 bp (1066 high quality bases) assembled on 2009-06-30
> UFO04703.5prime
CAGTCGACATGGAGAACAGGAGGTGCACCGTCGTTGCCGTGGGTGACCTT
GTGGATGAGCTTGGCTTCTGTTGCGAGTGGTGTGGCAAGGTGTACAAGAG
TCTTGTCCGCTACCACAACCACATTGTATGCACCCACAAGTTACCTGTTC
CGGATCACCAGTTGGTCAACTGCTTCCACTGTCCACGCAGCGATTGCAGA
TTCCACAAGCATGGACCCGGAGTACAGAATTTTCGGCAAATTGGAAGGCT
CCGCCGCCACTACCAGGAGAAGCACATGACAGGACACCTTACGTGCGAGT
ACTGCCAGAAGCAGTTTCAACTGAAGTCAGCGCTGGTGGCCCACAGATGT
CGGCTGAGGCATCCAGCCATCAGGGATAGTCAGTCCGCCATCACTTTGGG
GAGGCATGTGTGCAAAAAAGGCTACACGCATCTGGGCGCCCTACAACGGC
GCCTCACCTGCTGCCAGCATGGAACACCAAATACTCCGACGGAGGACCAG
AAGGATATAAGGGACACGGTGTGTCTGCAATGCAACAAGGAATATGTTGA
CACCCATCGCTGTTGTGTACGAACCGAGCGAAGCTTTCAGTCTGACCGTC
TCATCTTCAGAAAGTCTAGTCAGGAGACCCACGGTAAATCCAGGTACCTG
CAGGCGGAAGACTGGCGCTTTCTGTTTGAAATGGAGCAGCTTGTCCGCGG
CATTGACGACGGGCTTGTGCGGGACCCTTTGTTGCTCACGGAACTCGCCT
CTCTGGTGCCGGTGCTTCAGCAAATCCAGGATTCTGATTTAGAAATAAAG
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAACGCCCGGCGGCAAC
CGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGATCTA
TCACAGGAGTCCAAGCGAGCTCGAATATCAATTACGCCCCCGCCCTGCCA
CCTCAATCGCAGTACTGTTTGTAATCATTAAGCATCTGCCCGACTGAGGC
ATCCAAACCGCATGATGAACCTGATCGCAGCGCAATCAGACCTGACGCCT
TGGCCTATAT
UFO04703.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14451-RA | 862 | CG14451-RA | 51..842 | 9..800 | 3960 | 100 | Plus |
| mael-RD | 2143 | CG11254-RD | 48..273 | 800..575 | 1130 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22721250..22722041 | 800..9 | 3960 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:23:43 has no hits.
UFO04703.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:34:05 Download gff for
UFO04703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 1..795 | 9..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:10 Download gff for
UFO04703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 44..842 | 1..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:55 Download gff for
UFO04703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 44..842 | 1..800 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:55 Download gff for
UFO04703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22721250..22722048 | 1..800 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:10 Download gff for
UFO04703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22714350..22715148 | 1..800 | 99 | | Minus |
