UFO04706.5prime Sequence
1097 bp (986 high quality bases) assembled on 2009-06-30
> UFO04706.5prime
CAGTCGACATGGCCACCCAGGGAAAGAGCGTGGACTTTAGCGTATTGGAG
TTTGACAATTACAATGACTACATCTCCTCGTTTGCCACCGTCACGGACCA
CAGATATCTGGGCAATCAAAACACGATCAAGACCATCGTCCAGCTGGGTT
ACCGCACCACCAAGATACCCTACACAGCCGAAGAGTATGAGAAGAGGGTT
GACCTGGCCCTGGAGGCCATTAGGCCGAAGCTGGCACACGTGGGCCTGTT
CAGCGACCTCCTGTCGCCGACGAACAGGGACCCAGTTCTTCTGGAGTTCA
AGGCCCGCGAGCTGCTCAACTTGAACAAGATACTATCGACCATCGTTTTT
ACCTCGTACATCCACATGGACGGCTCGGAGATCTCCGGCTACATAGACCT
GGACATGAGCTGGCGCAACTGCTTCCGCGAGGCAATCAAGCACACGGACT
GGCGGGGAGTCTTCCAAGGTCGCTCTCGCCTGAAGCCCATGCCACACCAT
CTCAGCTACTCGAATCCCCGGTATAACGTGGTCAAGTACACGGATAGCGA
TAACTACCAGGTGATGCACGACCATCACTTCGGACTGATGTTCATGCATC
GCGGTGACCACAAAATGATTTCGGTGGGCGGCCAGTTCAACATTTACTCG
AGGAACGCCAAGCGATCGATGGTCTACTCTCCCAAGTTCGGGTATGTTGT
GTTCTACGATCACTTTGTCCGCAAGAAGGTAGCAAGCTTTCTAGACCATT
CGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCAT
AATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGG
ATTCTCACCAATAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATC
CAGATGAGTTCTGAGTCATTACTGATCTATCACAGAGTCAGCGAGCTCGA
TATCAAATTACGCCCGCCTGCCACTCATCGCAGTACTGTGTATCATAGCA
TCTGCGGACATGCAGCATCACAAACGCATGATGACTGATCGCAGCGGCAT
CAGGACTTGTCGCTGCGTAATATATTTGCATGTGAACGGGGCAAAAA
UFO04706.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14013-RA | 955 | CG14013-RA | 136..858 | 9..731 | 3570 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5552940..5553333 | 731..338 | 1940 | 99.5 | Minus |
| 2L | 23513712 | 2L | 5553386..5553715 | 338..9 | 1635 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:28:39 has no hits.
UFO04706.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:56 Download gff for
UFO04706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14013-RA | 134..856 | 9..731 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:06 Download gff for
UFO04706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14013-RA | 136..858 | 9..731 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:05 Download gff for
UFO04706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14013-RA | 136..858 | 9..731 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:05 Download gff for
UFO04706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5552940..5553332 | 339..731 | 99 | <- | Minus |
| 2L | 5553386..5553715 | 9..338 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:06 Download gff for
UFO04706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5553386..5553715 | 9..338 | 99 | | Minus |
| arm_2L | 5552940..5553332 | 339..731 | 99 | <- | Minus |
