UFO04715.5prime Sequence
1119 bp (1017 high quality bases) assembled on 2009-06-30
> UFO04715.5prime
CAGTCGACATGGATTGGATCAAAATATTTGTTTCAGGTCTTGCCCTGCTA
TTGATTGGGATGGCGCAGTGCTACCCGCAGTTCGATAGCGAAAACCCCTG
GTTGAGGCCTCGGCAACCCACTGAACCTACGATATCTCCGAATGCGGGGG
GCAGTACCCCGGCCAACGCTGCTCCACCAACCACCCAGTCACCGCGCTAT
TTCGCCTGTTTCCATTCATGCCCGGCCACCAGCGAGTACAATCCAATCTG
CGGCAGTGATAACGTGAACTACTACAATGAAAACAAGTTCAACTGCGCCT
TGAACTGCGGCCTAAACATCCGGAAGGTGCACAAGGGAATTTGTCAGACT
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAA
CCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATC
TATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGC
CACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAA
GCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCT
TGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAG
TTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGG
ATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGG
CCAGGTTTTCACCGTAACACGCCACATCTTGCGATATATGTGTAGAAACT
GCCGGAAATCGTCGTGTATTCACTCAGAGCGATGAAAACGTTTCAGTTTG
CTCATGAAAACGTGTAACAAGGTGACACTATCCCATATCACAGCTCACGT
CTTTCATGCATACGAAATCGATGACATCATCAGCGGCAGAATGGTGAATA
AGCGATAACTTGTGCTATTTTCTTTACGGCTTAAAGCGTAATCCAGCTGA
CGTCTGATTAGTAATGGAC
UFO04715.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Kaz1-ORFB-RF | 1130 | CG1220-RF | 616..961 | 5..350 | 1715 | 99.7 | Plus |
| Kaz1-ORFB-RE | 1143 | CG1220-RE | 629..974 | 5..350 | 1715 | 99.7 | Plus |
| Kaz1-ORFB-RA | 562 | CG1220-RA | 48..393 | 5..350 | 1715 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 217490..217775 | 30..315 | 1430 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:35:25 has no hits.
UFO04715.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2010-07-30 09:31:58 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 22:37:42 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 20:14:11 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:11 Download gff for
UFO04715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 217491..217775 | 31..315 | 100 | -> | Plus |
| 3L | 217855..217889 | 316..350 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:42 Download gff for
UFO04715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 217491..217775 | 31..315 | 100 | -> | Plus |
| arm_3L | 217855..217889 | 316..350 | 100 | == | Plus |
