UFO04734.5prime Sequence
1090 bp (944 high quality bases) assembled on 2009-06-30
> UFO04734.5prime
CAGTCGACATGTCGGACCCGTGTTGGACGACAGTATTTTTATGGCTGCTC
TGGCTGCCACACCTCCAGCAAAATGCTTTGGTTTCTGGCGAGGATCTACC
ACCGCCGTTCCAGCGGATCTACCAATCGGAACAGACGGTACGACGTTCAA
AGGCTCAGGATATGGGCAGTCATGTGAACAAAAGCATCGATCCCTGTGTG
GATTTCTATGCATATGCATGCGGCAATTGGAAGTCAACTCTAACCCCACA
GCAGCAATTGCAGCAGCAAACAGACCGGGAGCTTCTTCTGCTCGTGGAGG
AGGCTGTAAGGAGAGAGGATAGCGTCATAGTTCGACAGGCCAAGGAGCTA
TTCAAGTCCTGCGTATCGGCACAGGCTCATCAGAGCCAGCAGCAGCAGCA
TTTCCTCAGCGAGTTCATCAACCAGAACGGAGGCTTTCCAGCTGTTCCCG
GTTCCCAATGGGCAGTGCATCACCATGACTACAATTGGCTTAGTGTGTTA
GGTGGTCTAAGACTTCGCTATGGAATGGACATCCTGATCGGACTCCGAGT
GGGCTATAACTATGGCAATGTAAATGAGAACAGCTTGTATTTAAGTGAAC
CGAGCACATTGATTCCAACCGAGTTGTGCACTCGGAATCGCTCAGATATT
CGGGACTCCATTTACGAACCCCTTGAACATCGAGTGGCATCCGAACTAAA
ATCTTGGTTGGCATTGGGACACGATGAATCCGCTCGTCTAGCTGCCGACA
TTCTTAGTTTCGAGCATGAGTTATGTGGTGGAATGAAAGGTGGATCCTTT
GAATCCTGGGATGCCGAGGACCAGCTCTATCTAGCCAACTACACCCGCAA
AACGTTGCGTGAGTTCTCGAATTCCGATCGAACTGGATTTGGATTCATAT
GTAAAGGCCAAGTTTTGCCCAGATATTTATAATCCCGTTTACATGCCAGC
CACGGGAATATTTTTCGCCAACTTAAGCGCACTGTGAGTGCCCCATACAT
AAGTCTAGTGCCTTATCTATATAATTGTATCCGAGCGGTTGCCTGCTCTG
ATTTTCCTTCTAGATGAATCGCCCGCAGTTAAGGGACGGG
UFO04734.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:51:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4723-RA | 2272 | CG4723-RA | 20..1088 | 8..1084 | 4915 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:51:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22762624..22763692 | 1084..8 | 4685 | 97.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:51:06 has no hits.
UFO04734.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:12:48 Download gff for
UFO04734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4723-RA | 13..1019 | 1..1010 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:14 Download gff for
UFO04734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4723-RA | 13..1019 | 1..1010 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:48 Download gff for
UFO04734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4723-RA | 13..1019 | 1..1010 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:48 Download gff for
UFO04734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22762693..22763695 | 1..1010 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:14 Download gff for
UFO04734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18588415..18589417 | 1..1010 | 98 | | Minus |
