UFO04739.5prime Sequence
1158 bp (1040 high quality bases) assembled on 2009-06-30
> UFO04739.5prime
CAGTCGACATGGATAGCGTTCCTGCGAATGTTGTGCCTGCGAAGGAGTCT
GGTGGTTTCACCTCACATTGCGTCCACTTGGCGGCGGGTCCCTCGCAATT
CACCGTGCGCGCCCTGAAAATGCAAGGCAGCACCATGCTGATCATAAACC
CCAAGGGATTGGAGGTTTTCGAGGAGCTAGCGGTGGCCATGCCCTCTCGC
AATCCCGCCAGCAGCCAGTCCCTATCCTCCACAATCCTGGGCGGACACGG
GCAGACCGACTCATCTGTTCTGGCCGCCAAATTGAGTAAACGCTACTGCC
GCCAGTTCTACGTGAGCCTTAATCTCAAACTGGATCGATTAATGGGCCCT
CTGTTCGAGAAGACGCTAGTCACCTACATGCAAGACCATCTGGAGCACTT
CGCTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCC
CTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAT
GGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGC
ACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAA
GAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCC
AGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAA
TAGGCCAGGTTTTCACCGTACACGCCACATCTTGCGAATATATGTGTAGA
AACTGCCGGAAATCGTCGTGTATTCACTCAGAGCGATGAAACGTTTCAGT
TTGCTCATGGAAACGGTGTACAGGTGACACTATCCCATATCACAGCTCAC
GTCTTTCATGCATACGAATCGATGACATCATCAGCCGCCAGATGTGATAG
GCGATAACTTGGCTATTTCTACGGCCTTAAAGCGTATTTCCAGCTTAACG
GCCTGTTT
UFO04739.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13319-RB | 687 | CG13319-RB | 46..441 | 9..404 | 1980 | 100 | Plus |
| CG13319-RA | 691 | CG13319-RA | 46..441 | 9..404 | 1980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12923949..12924344 | 9..404 | 1980 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:34:55 has no hits.
UFO04739.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:32:07 Download gff for
UFO04739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13319-RA | 38..441 | 1..404 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:21 Download gff for
UFO04739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13319-RA | 38..441 | 1..404 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:56 Download gff for
UFO04739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13319-RA | 38..441 | 1..404 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:56 Download gff for
UFO04739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12923941..12924344 | 1..404 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:21 Download gff for
UFO04739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8811446..8811849 | 1..404 | 99 | == | Plus |
