UFO04748.5prime Sequence
1027 bp (-103 high quality bases) assembled on 2009-06-30
> UFO04748.5prime
CAGTCGACTCTCTCTACTAAATGCCGTGGTGCACGGTTGGGCTAGAAGGA
TAAGGGCCCCATCGAGAATCCCACAGTGCCGGTGCCGATATCTACGACGT
GGTGGTCATCGGAGGCGGACATGCCGGAACAGAGGCCTCGGCGGCAGCTG
CTCGCATGGGATCACGCACCCTGCTGCTAACCCACAAACTGGAGACTATT
GGCGAGATGTCCTGCAACCCGTCGTTCGGTGGCATTGGCAAGGGTCACCT
GATGCACGAGGTGGATGCCCTGGATGGCGTATGTGCCCGCTGCTGCGATG
TTTCCGGAGTACACTACAAGGTGCTCAATAGACGGCGCGGTCCAGCTGTT
TGGGGGCCCAGGGCGCAGATCGATCGCCAGCTGTACAAAAAGGCTGTGCA
GCAGGAACTGCACAGCACCCCCAATCTGGAGATTCGAGCAGCCGCTGTGG
ACAACCTGCTGATAGAGGATGAACAGGATACCCAAGCCCGCCGTTGTACC
GGCGTCCTTTTGGCCAACGGAGAAGTGGTACGTAGTCGATCCGTGGTACT
CACCACGGGAACATTCCTGCGGGCACACATAAACATCGGACTCGAGGTGC
GACCGGCCGGCCGAATTGGATACGCTCCACCCAAAGCGCTGGGCGAGGCG
ATCGACAGATGATGTTTTCGCATGGGGAGGCTGAAAACTGCAACTCCGCC
TAGAATAGCAAAGGACAGTGTGGATTTCTCACAGCTCCAAGGCACGAAAG
TGATGATCCGCCTATGCCTTTCTCCTTTCTCACAAAGACGTTTGGCTACC
CGCCCAAGGACCAACTACCCTGCTACTTACCTACACCACACCAAAAGTCA
GCGACATTGTGCGCGACAATCTTCATGTAAATCGCCATGTCACCGAGGAG
ATTACCGGTCCACCACTACTGCCCTCGTATTGAGTCCAAGATTCTTGAGG
TTCGGCGCGAAAGGTTACATCAGGGTGTTGATTCAGAGCCCGGAATGTCT
GGACAGATTCCCTTAATGTATCCCCCA
UFO04748.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4610-RA | 2099 | CG4610-RA | 53..1058 | 14..1025 | 4415 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22492249..22493198 | 14..961 | 4160 | 97.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:54:09 has no hits.
UFO04748.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:32:06 Download gff for
UFO04748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4610-RA | 36..1003 | 14..983 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:10 Download gff for
UFO04748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4610-RA | 53..1020 | 14..983 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:33:37 Download gff for
UFO04748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4610-RA | 53..1020 | 14..983 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:37 Download gff for
UFO04748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22492249..22493216 | 14..983 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:10 Download gff for
UFO04748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18379754..18380721 | 14..983 | 97 | | Plus |
