UFO04756.5prime Sequence
897 bp (896 high quality bases) assembled on 2009-06-30
> UFO04756.5prime
CAGTCGACATGGGTGGGGTGCTCAGCTACTTTCGCGGACTGCTCGGCTCC
CGGGAGATGCGCATCTTGATCCTGGGCCTGGACGGCGCCGGCAAGACCAC
GATCCTCTACAGACTGCAGGTGGGCGAGGTGGTCACCACGATACCCACCA
TCGGCTTCAACGTGGAGCAGGTCACCTACAAGAACCTCAAGTTCCAGGTC
TGGGATTTGGGCGGACAGACAAGTATTAGACCTTATTGGCGTTGCTACTA
CAGCAACACGGACGCAATCATCTATGTGGTGGACTCGGCGGACCGGGACC
GCATTGGCATCTCCAAGGACGAGCTGCTGTACATGCTGCGTGAGGAGGAG
CTGGCCGGCGCGATACTGGTCGTCCTGGCGAACAAGCAGGACATGGACGG
ATGCATGACCGTCGCCGAGGTCCATCATGCGTTAGGACTGGAGAACCTAA
AGAACCGCACATTTCAAATATTCAAAACGTCGGCCACCAAGGGCGAGGGA
CTCGACCAGGCCATGGACTGGCTGTCCAACACCCTGCAGAGTCGCAAGGC
AAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATA
ATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGG
TCATGACTAGTGCTTGGATTCTCACCAAATAAAAAACGCCCGGCGGCAAC
CGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCT
ATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCC
ACTCATCGCAGTACTGTTGTATTTCATTAAGCATTCTGCCGACTTGGAAA
CCATCACAACGGCTTGATAACCTGATCCGCCGCGGCTCCTCCCCTTG
UFO04756.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Arl1-RA | 863 | CG6025-RA | 142..682 | 8..548 | 2705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15983860..15984181 | 227..548 | 1610 | 100 | Plus |
| 3L | 28110227 | 3L | 15983377..15983594 | 12..229 | 1090 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:54:35 has no hits.
UFO04756.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:32:16 Download gff for
UFO04756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arf72A-RA | 146..696 | 1..548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:32 Download gff for
UFO04756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arl1-RA | 132..682 | 1..548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:33:56 Download gff for
UFO04756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arl1-RA | 132..682 | 1..548 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:56 Download gff for
UFO04756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15983373..15983594 | 4..229 | 98 | -> | Plus |
| 3L | 15983863..15984181 | 230..548 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:32 Download gff for
UFO04756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15976473..15976694 | 4..229 | 98 | -> | Plus |
| arm_3L | 15976963..15977281 | 230..548 | 100 | == | Plus |
