UFO04758.5prime Sequence
1102 bp (991 high quality bases) assembled on 2009-06-30
> UFO04758.5prime
CAGTCGACATGGATTCAGCCATCTCAGAGATAATCAATGCCCTGGCTATA
CTGGCCGACGATAAAAATATCCAGTTGACCATCAAGGAGGCCGGCAAGGG
AGCTGCAATTTGTGCTGGCGCTGCGCTGATCGGAGGACTACTGCTGGGCC
CCCGGGGACTGGCACTGGGCGGGGCCATCGGTGGTCTCACCGCCTACGGA
CTTACGGAGGGAAATTTCAAATCTCTAAGTGAGGTCATTTTGAACGATTT
GACGGAGAGTCAGCGTCGAGAACTGGAGCAGCACGTGATCAGGGCCATAT
CCGAAGTTAGAAATGTACGCGTTCGAGATGTCGCAAGACTAATACTAAAT
AACCGGCATGTGCAAGAGGTTGCACTCGAAGCAGTCAAGTCCTATATCAC
TGATCGTATGGGAATGACCATCGTTGATGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGA
ACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTT
GCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGTCACGTTTA
AATCAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATAT
TTCTCATAACCCTTTAGGGAAATAGGCCAGTTTTCACCGGTAACACGCCA
CATCTTTGCGAATATTATGTTGTAGAAACTGCCGGAATCGTCTGGTATTC
ACTCCAGAGCGGATGAAAACGTCCAGTGCTCATGGAAACGGTGTAACAAG
GGTGAACACTATCCCTAATCCAGCTCACGGCTTCATGCTTACGATCGATG
AC
UFO04758.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11671-RA | 681 | CG11671-RA | 164..583 | 9..428 | 2100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8288297..8288515 | 210..428 | 1095 | 100 | Plus |
| 3R | 32079331 | 3R | 8288039..8288241 | 9..211 | 1015 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:49:38 has no hits.
UFO04758.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:32:12 Download gff for
UFO04758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11671-RA | 101..528 | 9..437 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:15:13 Download gff for
UFO04758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11671-RA | 164..591 | 9..437 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:11 Download gff for
UFO04758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11671-RA | 164..591 | 9..437 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:11 Download gff for
UFO04758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8288039..8288240 | 9..210 | 100 | -> | Plus |
| 3R | 8288298..8288515 | 211..428 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:15:13 Download gff for
UFO04758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4113761..4113962 | 9..210 | 100 | -> | Plus |
| arm_3R | 4114020..4114237 | 211..428 | 100 | == | Plus |
