UFO04762.5prime Sequence
1138 bp (1015 high quality bases) assembled on 2009-06-30
> UFO04762.5prime
CAGTCGACATGGAAGTGAATCAAAAATGGAACTGGGACACCAAGCCAATT
CTGGTCAAATGCGGAGGATTCTCCTCGCAATTGGCCAAGAATGTCACCGA
AAAAGTGGACGGTGATCCACTGTGGGGATCGCGATTCGATGCCACCAATC
CGGAAGCTGTGATCCAAACACATCTGGACTTTCTCCGCAACGGAGCGGAT
ATTATTCTAACCAACACGTATCAGTCCAGCGTCGAGGGATTCGTGAAGTA
CCTGGGCGTGACCAGAGAACGAGGTGTGGAGTTGATCCAAAAGAGCGTTC
AACTGGCCAAGCAGGCAAAGGAACAGTACCTTAGCGAAATCGGTTCTGAA
GCGGAGTCGGCTCTTCCACTGATCATGGGCTCAATAGGTCCATATGGCGC
CTATCTCCACGATGGATCTGAGTACACCGGCAACTATGCGGACAAGATGT
CCAAGGAGGAGCTGAGGGCGTGGCACAAGACAAGAATTGAGATTTGTCTC
GCAGCTGGAGTGGATGGATTGGCCCTGGAAACACTTCCATGTCTGATGGA
GGCAGAGGCAGTCACCGAATTAGTACTGGACAACTTTCCGGATGCCAAAT
TCTGGGTCTCCCTGCAGTGCATGGATGAAAAGCACATGGCTAGTGGAGAA
AACTTCGCGGAGGCGGCTCTCTCCCTCTGGCGGTTGGTCCAAAGTCGGAA
GGCTGAAAACCGGCTCCTTGGGATCGGTCTGAACTGTGTAAACCCACTAT
TCGTGACCCCTTTGCTATCATCGCTTACCAAAGTGGCCGGTTCGGATCGC
ATCCCACTGGTGGTCTACAGCAATCGCGGCGAGATCTACGACGTCGAGCA
GGAGATTGGACTGGAACCGGCGAGGAGTGGTCAAGTTTGTGCCCGAGTGG
ATCCAGCTGGGAGTGCGCATCGTTGGCGGCTGTTGCCGGGTCTATCCGAC
GGACGTGTTGGCGATCCGCAAGTACGTCGATGGCCTCAACATAAAGCCGC
AAGCTTTCTAGACCATTCGTTTGGCGCGCGGCCAGGTAGTGGTCATAATC
ATATCATAATATAATCCTAATCACACTAGGCCTAGGAGATTCTGGTCATG
ACATATGGCTGGATTCTCACATAAACGCCCGCGCGCAA
UFO04762.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10623-RC | 1725 | CG10623-RC | 264..1259 | 6..999 | 4900 | 99.6 | Plus |
| CG10623-RB | 1494 | CG10623-RB | 33..1028 | 6..999 | 4900 | 99.6 | Plus |
| CG10623-RA | 1583 | CG10623-RA | 122..1117 | 6..999 | 4900 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18956430..18957048 | 624..6 | 3080 | 99.8 | Minus |
| 2L | 23513712 | 2L | 18955947..18956325 | 999..623 | 1780 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:50:45 has no hits.
UFO04762.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:14 Download gff for
UFO04762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10623-RA | 115..1120 | 1..1002 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:15:51 Download gff for
UFO04762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10623-RA | 115..1120 | 1..1002 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:41 Download gff for
UFO04762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10623-RA | 115..1120 | 1..1002 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:41 Download gff for
UFO04762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18955944..18956324 | 624..1002 | 98 | <- | Minus |
| 2L | 18956431..18957055 | 1..623 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:15:51 Download gff for
UFO04762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18955944..18956324 | 624..1002 | 98 | <- | Minus |
| arm_2L | 18956431..18957055 | 1..623 | 99 | | Minus |
