UFO04765.5prime Sequence
1102 bp (1025 high quality bases) assembled on 2009-06-30
> UFO04765.5prime
CAGTCGACATGTCTCGCAGTGCTCGCCCCCTCACCTCCGCCCGTGTACTG
CACAAAATCAAGGAATTAACAACCCCGCAAGCCAGCACTGAATACGTGAT
CAACCGGAATCCACGGAACTTGGAAAGATTACGCATTGCCTACAAGCCGG
TAGGCTATCATCTGGAGAAACCAGGTCGTTCCTACTGGCACACTTTGGAA
ATCAACACCAGCGGCCGCTATGTCAGCGGCGATGTCAAGCACTTTGAGAA
TGGAACCATCCTGAGTGCCAGCACCTCGGAATGGGCCATTAAACAGCAGT
TGTACAAGACCAACGACACATCTGCGTTTGTAAATCTCGGCAGAGTGCTC
GCACAGCGCTGCCTGCAGTCTGGGATCACGGAAATGACCTGCAACGTGGA
GGCGGTACCGGGTAGCAAGCTGCAGAAGCTGCTTCAAACCATTCAGGATA
ATGGGGTGTCCTTCAAGGAACCCTCTCGCCTGCCCAACGAGCAGCCCTGG
GATGAGAAGAGGCATGAGAAGCCCTGGGAGGTGTCGGAAGACGCACTGGA
AGCACCCAAATCAAAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTATCAACAGGGAGTCCAAGCGAGCTCGATATCAA
ATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGC
ATTCTGCCGACATGGAAGCCATCACAACGGCATGATGAACCTGATTCGCC
AGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTTGCCCATGGTGAA
CGGGGGCGAAGAGTTGTCATATTGGCACGTTTAAATCAAACTGGTGAAAC
TCACCCAGGGATTGCTGAAACGAAAAACTATTCTCAATTAACCCTTTAGG
AATAGGCCAGTTCACCGTACAGCACAATCTGCAATATGGTAAAACTGCGA
AT
UFO04765.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL18-RA | 740 | CG12373-RA | 121..678 | 9..566 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12756554..12757111 | 9..566 | 2790 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:36:12 has no hits.
UFO04765.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:33:21 Download gff for
UFO04765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL18-RA | 156..716 | 9..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:14 Download gff for
UFO04765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL18-RA | 121..681 | 9..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:35 Download gff for
UFO04765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL18-RA | 121..681 | 9..570 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:35 Download gff for
UFO04765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12756554..12757114 | 9..570 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:14 Download gff for
UFO04765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8644059..8644619 | 9..570 | 99 | == | Plus |
