UFO04768.5prime Sequence
1013 bp (960 high quality bases) assembled on 2009-06-30
> UFO04768.5prime
CAGTCGACATGCACTTTAGTATAACAAATTCTCGCCAAGATATGAAGCCG
TATTTAGATTCAGATTATTCCATCAGTCGCAATTTGCGTCAGAGACATAG
AAAAAAAGGAGTTTCTAACGAATACTCAAATTATTTAGATTCCGAAAATA
AAAAAAAAGGCAGAAAGAAATGTCAAAATAGCGCATATGATGAATACGGA
AATATTCGCTCAAACGGTCTGGACATATGCGACTGTATGAATCAAGAATG
TGATGGTTGCTGGTATAATTGCCGAAGTTGTGGCTCTACCAGGTGTGGTC
CCCAATGTCGCTCGAATCGAAAGTTTTTTTATGAGGACATAACATATGAC
GGTAAAGATTTAAATATTCAAAATAAATATATACCAAGAGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCT
GAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGA
GTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCA
GTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAA
CGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGC
GTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATT
GGCCACGTTTAAATCAAACTGGTGAAACTCACCCAGGGATTGGCTGAGAC
GAAAAACATATTCTCATTAACCCTTTAGGAAATAGGCCAGGTTTCACCGT
AACACGCCACATCTGCGAATATTATGTTGTAGAACTGCGAAATCGTCTGT
ATTCACTCCGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAAACGTGT
TAACAAGGCGTAT
UFO04768.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:52:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14464-RD | 1289 | CG14464-RD | 28..409 | 8..389 | 1910 | 100 | Plus |
| CG14464-RC | 637 | CG14464-RC | 28..409 | 8..389 | 1910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:52:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 4829273..4829494 | 8..229 | 1110 | 100 | Plus |
| 2R | 25286936 | 2R | 4829547..4829707 | 229..389 | 805 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:52:09 has no hits.
UFO04768.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:32:19 Download gff for
UFO04768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14464-RC | 49..442 | 1..397 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:53 Download gff for
UFO04768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14464-RC | 23..416 | 1..397 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:19 Download gff for
UFO04768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14464-RC | 23..416 | 1..397 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:19 Download gff for
UFO04768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 4829268..4829493 | 1..228 | 98 | -> | Plus |
| 2R | 4829547..4829707 | 229..389 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:53 Download gff for
UFO04768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 716773..716998 | 1..228 | 98 | -> | Plus |
| arm_2R | 717052..717212 | 229..389 | 100 | == | Plus |
