UFO04771.5prime Sequence
1110 bp (992 high quality bases) assembled on 2009-06-30
> UFO04771.5prime
CAGTCGACATGAACAAGAGCGATGGAAACGAGAGCTTTGCTCTGGACAGT
CTCCCGGAAAACATTCGTTACCCTTTCGGAAAACGAGAACTGGAAATCCT
GGAGAAGCAACTAGATCGAATTGTTTTGATATACCAGGTGGATACCACAT
ACCACAGTGCACTAAAGGACATAAAGGATCAGAAGATCATATCGCTGCTG
GTGGAGCCCAGTTTTTACGGACGACATCACCCCACGTCTATTTTGGTGGT
AGCCACGTGCAATGGAACGTACATTTTCGACATCAAGGCCCTTGGCTTGA
TATTTCTGGAACTGGCCAAGATTCTGGAGGCGGATCAGCCGCGCAAGGTA
ATCCACTACAGCCACCGGATCGCCGATCATCTGTTGCATAGGCAACGCAT
CTCGTTGGGAGGAATATTTGATACCTTTGTGGCTGTATGCCTGAGCAGCA
ACACAAGAATTCCGTACACCTTGCCAGAGGCTATATCTCTCGTCTTCGGA
CTACCCATGGAGAAGGTGACTGGAGGCTGTGAGTCGCAGCGTAACTTCAC
TGCTCGTCCACTGACCCACAGTCAAATGAGATACTTGGCCAAGTTGGTCC
AGCTTCAACACATAATGCACGATCATTTGAATTATAGTCACATCTTTTGC
GCCGAGGTTTATCGCATATCCTTAGAGTTCAGCCACAGCTACTACGGCTT
ACGGTCCTGCGACGTCGCCATAAACATGGCACCTGCCAGTAGCTTCGGGT
TCCAACTCTTAGATTCATTCTGCAAAAAGGCCGACAAGGAACTCGAGCAG
ATCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTCGGTCATGACTAGTGCTTGGATTCTTCAACAATAAAAACCGCCCGGC
GGCAACCGAAGCGTTCTTGAACAAATTCAGAATGGAGTTCTGAAGGTCAT
TACTGGGATCTATCAACAGGAGAGTCCAGCGAGCTCTGATATTCAAAGTT
ACGGCCCGCCTGGCCAATCCATCCTAGTACTGATGTAACTCATAAGACAT
TGCCGACATG
UFO04771.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11263-RB | 1017 | CG11263-RB | 48..842 | 9..803 | 3975 | 100 | Plus |
| CG11263-RA | 1065 | CG11263-RA | 96..890 | 9..803 | 3975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13006912..13007706 | 9..803 | 3975 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:23:25 has no hits.
UFO04771.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:32:17 Download gff for
UFO04771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 89..883 | 9..803 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:01 Download gff for
UFO04771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 96..890 | 9..803 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:47 Download gff for
UFO04771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 96..890 | 9..803 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:47 Download gff for
UFO04771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13006912..13007706 | 9..803 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:01 Download gff for
UFO04771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13000012..13000806 | 9..803 | 100 | == | Plus |
