UFO04773.5prime Sequence
1120 bp (1009 high quality bases) assembled on 2009-06-30
> UFO04773.5prime
CAGTCGACATGTCCGAGATCAAGGCGTTGGAGCACGCCACCCTAAAAGTG
CCATACGAGATGCTGAACAAGCGCTTCCGTTCGGCACAGAAGATCATCGA
CAGGGAGGTGGACCAGGTGATCAATGTATCGCGTCAGGTGGAAAAGGCCC
TAGAAGCAGAGGAGGGTCCCATTCTGGCCGAGGTCACCAAGCTGGTGGAT
AACGTAGCGCAGAAATTGCAGGTGCTCAAGCGCAAGGCCGAGGAGAGCAT
CAATGATGAGCTGAGCGTCACACAGATCTGCAAGCGCAAGCTGGACCACC
TAAAGGGCATTACACCGCCAAGCAGCGTTACAGGCGACCTGTGGCAGGGT
TCCGTGGACCAATGGAAGCGGATCCGACTAGACCGCCTGGTCATCGAGCA
CCTGCTGCGCATGGGATACTATGAAACGGCCGAGGAGCTGGCCGCCAAGT
CCGATGTGCGCCACCTGACCAACCTGGACATTTTTCAGACGTCGCGCGAG
GTCGAGGATGACTTGGCCAGTCACAGCACCACCAAATGCGTGCTTTGGTG
CATAGACAATAAGTCTAAGCTCCGCAAGATCAACTCGACCATTGAATTCA
GCCTGAGGGTGCAAGAGTTCATCGAGCTCGTGCGTCAAAATCAGCGTTTT
GAGGCTGTGAAGCATTCGCGTCGCTACTTCCCCGCATACGAGAAGACTCA
GCTGAATGAGATCTGCCACGTGATGGCCCTGCTGGCCTATCCGGCCGATG
CCCAAGCCGAGCACTACCGCAAGTACATGGATCCGCAGCGGTGGCAAAAG
TTGGTGTTGGACTTCCGTCAAGAGAACTACCGCCTCTTCCAGCTATCCAG
CACGTCCGTCTTCTCGGCAGCCGTGCAGGCCGGTCTGTCGGCCCTGAAGA
CGCCCCACTGCTATGCTCAGACCTGCCGTAACCTTAACTGCCCCGGTGTG
TCAGGAGGATCTCAACCGCATCGCTCTTCAAGTTGCATACTCGCACTGTG
TGCAGAGCGTCTTTAATTGCCGGGTCACATGCTGCGCTCACCGAGCACAA
TCAAGTCGGAGGATGCTGGCCCACGGGAACAGATCTTTGGTCGAATGCTC
TGCCGGAACATTACCAGACG
UFO04773.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31357-RA | 1681 | CG31357-RA | 106..1210 | 9..1116 | 5085 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24828835..24829854 | 1029..9 | 4875 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:36:51 has no hits.
UFO04773.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:17 Download gff for
UFO04773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31357-RA | 70..1174 | 9..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:40 Download gff for
UFO04773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31357-RA | 106..1210 | 9..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:56 Download gff for
UFO04773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31357-RA | 106..1210 | 9..1116 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:56 Download gff for
UFO04773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24828750..24829854 | 9..1116 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:40 Download gff for
UFO04773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20654472..20655576 | 9..1116 | 97 | | Minus |
