UFO04777.5prime Sequence
1138 bp (1029 high quality bases) assembled on 2009-06-30
> UFO04777.5prime
CAGTCGACATGGACGGCATAAACAAGTACAACGAGTTTGTGGCGCTGCAC
AAGCCACAGCTGGAGTCCTCCGGTATTCCGCTGATATTTTGGCCGGCTCT
GTTCCGAAAACTGACCACGGAAACCTTCGATGCCGGCGAGGCACTCCAGT
TGATGCTGATCGACTACGATGAGGATGAACAGCAGAATCCGGCCGAGGAC
GATGACAGTCCCAACCCTGTGTTCGCACTGGGCGTAGCCCGGGAGCAGGG
CATAAAGGCCAGTGATCCTCAGGCCATCTATTTGGTCGATCACGCCTGGA
CGTTCCGGCTAAACGGTGCTCGGCAGCAGCTGGAGGAGTATCCGCAACTG
GCGGAGCGACTTTCTGCCATCACTGGCGTTGACCTTGAGCTGAAGGATCG
GGTCGACAAGATCCTGCGCCGTCTGTGGAAGTACTGCCACGCCTACTCCA
TCGGCAGCGAAGGCTTGTCGGACGAGGAGCGCCAGCCCATCTGGTATGTG
ATGGACGAAGTCGGCTCGGCTGTGAACCACTCGGACGATCCCAACTTTCG
ACTTGTTCCGCTGCTCTACCTAAACACCCAAACCACATACAGTGTGCTCT
TTCCGATTCGGGACTGCGATGTCGGAGAAGCGGTGACCCGCGATATGGTG
GAGCACGTGGCAAAGGATGCGCCCCAGCGGCCTGCGCTGCTTTTACCCTG
GCGCGATGCCGACCTCACGGGCGAAAGCTTCTTGCAGGTTGAACCCCGGG
CAGATTACTTTACCAGCGGTCACATCCCTGAGACCTATCCCAAAGGCGAT
ACTGTTCCACTGCCAGCCAGGTCACGTTGCGATCCGCTGAATGTGTATGC
AGAGTACGAGGTGGTGCGCCGTCATCTAACTTCGTCCGAGTTCATCCTAG
TTAACAACGCAGACGAGGCGGATGTCCTTTGGCTCCCACACCACTTCAGA
ATTTCGAGGAATTTTGCAGATAGTCGCCCGGCAAGTTCATCATTCAGTTT
CCGTTCGAGTACGTGATCACCATCAAGGATCTCCTCTAGCAATTGGGGGG
CGCCGGGCGCCAAAGAAGCACCATGATAGCTACGCTGAAACGTTCCGGCA
TGTCCCACCACTATATCTGTCACGAGTAAAGGAGTCCC
UFO04777.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1550-RA | 1961 | CG1550-RA | 43..1180 | 9..1135 | 5180 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7810916..7811986 | 1080..9 | 5000 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:59:53 has no hits.
UFO04777.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:18 Download gff for
UFO04777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1550-RA | 44..1146 | 1..1102 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:58:32 Download gff for
UFO04777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1550-RA | 37..1139 | 1..1102 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:16 Download gff for
UFO04777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1550-RA | 37..1139 | 1..1102 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:16 Download gff for
UFO04777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7810890..7811992 | 1..1102 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:58:32 Download gff for
UFO04777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3698395..3699497 | 1..1102 | 98 | | Minus |
