UFO04791.5prime Sequence
1120 bp (1003 high quality bases) assembled on 2009-06-30
> UFO04791.5prime
CAGTCGACATGAAGTGCTTTTTTATCCTGATAGCAACCAGTCTGGTGCTG
AGTGCCTATGCCCAGGACGCGGCGGATTCTGACCTGGAGCAGGTGGCATC
CGCATCGGCACCGGATGCGGTGGCCGTGGAGGATCAGGTGAGCGCCGCCA
GCAGCTATGCCCCGCTGCAGGATAAGAAGCAGGAGAAGCGCTATGTTGGT
GGATACGGTGGCTACGGAGCGGGCTACGGCGCGGGATACGGCGGCTATGG
CGCCGGATATGGCGCAGGATACGGCGGCTATGCCTCTGGCCTGGGAGCCG
GCTATGGAGGAGCGTACGGCAGTGGCGTCGGCGTTGGCGTGGACAGCTAC
TACAATCCGTACAGCTCGCGAGCTCTGGGTGGATTAGATGGTGCTGCAGT
GGCCGGATACGGAGGCTATGGATCCACTCTGGGCGGCTATGGATCCGCTT
TGGGTGGCTATGGATCCGCTCTTGGTGGCTATGGATCGGGACTTAGTGGT
TATGGTGGCTCCTACAACTCGAATCCATACGCCCTGTCATACTACAACAG
CAGGCTGGGCGCTGGAGCCGGCACTGGGTATCCGTACTACAACACCCGAT
TCGGCGCTGGTGGCTATCCATCCAGTTACTATACGAGCAACTATGGCAAC
AGCGTGGTGGGCGGCGGCTTGGGCGCTTTGGGCGGAGTGCCGCCCATCGG
ATCGGGCTATAACTACGGTTCCGGAATCTCGGGAACCGTCTACGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCAT
AATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATG
ACTAGTGCTTGGATTCTCACAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGTCATTACTGGATCTAATCACAA
GAGTCCAAGCGAGCTCGATATCAATTACGCCCCGCCCTGCCCACTCATCG
CAAGTACTGTTTAATCATTAGCATTCTGCCGACTGAGCCATCACAACCGC
ATGAAGAACTGATCGCCACGCGCATCACCACTTGTGCCTTGCTATAATTG
CCATGCGTAACGGTCAGATG
UFO04791.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2157-RA | 965 | CG2157-RA | 95..831 | 7..743 | 3685 | 100 | Plus |
| CG2157-RB | 1004 | CG2157-RB | 95..837 | 7..743 | 3615 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10869737..10870103 | 21..387 | 1835 | 100 | Plus |
| X | 23542271 | X | 10870181..10870538 | 386..743 | 1790 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:17:22 has no hits.
UFO04791.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:27 Download gff for
UFO04791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2157-RA | 69..809 | 1..743 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:02:42 Download gff for
UFO04791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2157-RA | 91..831 | 1..743 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:59 Download gff for
UFO04791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2157-RA | 91..831 | 1..743 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:59 Download gff for
UFO04791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10869733..10870103 | 16..387 | 99 | -> | Plus |
| X | 10870183..10870538 | 388..743 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:02:42 Download gff for
UFO04791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10763766..10764136 | 16..387 | 99 | -> | Plus |
| arm_X | 10764216..10764571 | 388..743 | 100 | == | Plus |
