UFO04792.5prime Sequence
1113 bp (992 high quality bases) assembled on 2009-06-30
> UFO04792.5prime
CAGTCGACATGGAGTCGAGGGTCACCAGCGGCACAGGTCCACCGAACACC
ATTATGATCCAGCTGGTGTCCCAACAGCCCAGTTCCTGTGGACAGATGCA
GGCCATGCCCATTTCGGTGCAGACGATACCCTTGTTCCCCAATTCCAGAA
CATCGACAGAGCGACCTTGTCGATCGGTCTCCATTGCCCCGAATGTAAGA
CCTCCAACGGATGTCCCTCCTCCTCGAAGGAATTTAAGAATCCGACCCGA
GGAATATGCGACACCCAAGCGGAAGAATTCGCAAAGCCAGTTTCGTCATT
TCTCCCGCAGCATAAACCAACCTCCACCGGTGTACTATGTTCTTCGACCA
GAAGACCGTATTATGCCCATCTACATACCACCTCCGAGGTTTAACAATGA
GCAAGGATCAAGGATGGCGACGGAGTGTCCTTGCTGTGGCCATGCCAAGT
CATTGAACCCGGAGGAACCTCTAAGAGTCCACGTAGCGCAGAAAGAGTTT
GTCAAATTAGAGAAGGCAACTCCTGGACATCGGGATCAATGTACTAACAC
CATTGACCAGCCAGATGTGGGAAATATAAGGACGATTTACGAAACATTGG
GACGCGCAATGGTCACTGCAGCCGTGGAGGCAGCCCAGAGATCCCAGCCA
GCAGGACCCTCAGATCCGACAAATGTAATATTGAAACTATTAACCCAATT
GGGGGAGCAGAATCAAACAACAGGCTTGAGTCCACATTCAGAAGCAGTAG
CAGAAAGTCCCGACCACCAACCACATATGCGCAGGCCCAAAGCTAGCTTT
ACGGAAGCAGTCCGCATGATGGAGAGGACCTCGTCTGATCCTTCCATTGC
TAAAGGGCCACCAGATGAGCTAGATGACCAACGTAGGCTTCCATCTGTAC
TCCTCCGATGGTCGTCTTCGCGTCGATTATCCGAAAACCGCCTAGACCAC
ACCAACATACTTCCGTCGAATCTGAAAACACCCCTCAGTAATCATATGTC
CTCGGAAAGAATAAGACTCGATTCTGGTCTCGCCAAACCTGGGAAACTCA
ATGGACTAGCAAGCGCAGCTTTCTAGAACATTCGTTTGGGCGCGGGCCAG
TAATGGTCTTAAT
UFO04792.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:50:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13385-RA | 1238 | CG13385-RA | 92..1154 | 9..1069 | 5020 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:50:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8396740..8397779 | 9..1049 | 4860 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:50:56 has no hits.
UFO04792.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:27 Download gff for
UFO04792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-RA | 21..1090 | 1..1069 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:08 Download gff for
UFO04792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-RA | 21..1090 | 1..1069 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:43 Download gff for
UFO04792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13385-RA | 85..1154 | 1..1069 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:43 Download gff for
UFO04792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8396733..8397802 | 1..1069 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:08 Download gff for
UFO04792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8396733..8397802 | 1..1069 | 98 | | Plus |
