UFO04805.5prime Sequence
1109 bp (1021 high quality bases) assembled on 2009-06-30
> UFO04805.5prime
CAGTCGACATGGCGAACGTTAATTTGCAGATGCCGCTGATTGCAGCAGCC
ACCACCATACTGACAATTGTCAGTGGGGCCACCGCCAGCACCACATCCTC
GACAGAGACGGCCAAGAACCAGCCATTGTATCACAATATGGGGTCTTTGT
TCGAGAATCGATGGCTGCCAATGGATCAGCCGATGCAGCATCATCCCAAT
CATCGGTATGGCTCGTCCAAAATTCCACGGGCAAATGCGGGTGAAAGGAG
GGCCTTTAGCAGCGGCCATTCCTCAGGCTCCCGGCAAGGATTGGCCCATA
TGCTCAACGGACTAACAAATCTCTCGGGCCTGGGACACATTTCCAATGGG
TATGGCTCGGTGGCGCCCACCCATACGGAGGCACTGGCCCTGGGCTCCAC
CAAACAGGAGATACCGATTTACGAGGACCACAATGAAGATGCCACCGCGG
TGGCTGCCGTTGCAGCAGCTGGAGCCCATGATTTTGGCTCGGGAAATGAA
CAATCTGGCGGTGGATTGGAGAACAATCAAGAACATTCGCCGATTTACAA
TTATCCCGGTGCCGCACATAATGGTGGATTTTTGCCAGCCTACGGTTCAG
CTGGATCTGGTCACGAGCAGGACTACGCACAGTGGTCATCATCGGCGCCG
GAGGAGCAGCAGCCGGAACAGCAGGCGGCTCATCCCTATGCGTACGATAA
AATTTCAATGGGAAATTTCCTGCCGCCGTACATGCAGGACTCTGGATACG
ATGACCAGCAGGGGCAGCTTTACCACCAGCAGTTGCAACACCAACAACAG
CAGCAACAGCAACAGCATCTGCAGCAGCTGCAGCAGCAACAGCAGCAACT
GTACCACCAACAGCAGCAGCAGCAGCAGCAGCGCCAGGAACAGGACAGCA
CTCTTCGTATTTCGGCCACCATGACCATCCATTTCTGGATCCGCTGCATC
ATCGCTCATCTGCTCGAGCGATCTGGTGCTGATGACTTTGAGAGCATCCC
GATGCTGGGCAGAGCAGAGCTCACTACTGTCGAGCAGTTGTCATGCAGGG
ACCACCATCCTCGCCATCATGTGATATCATTACCTTGTGCGGTGGCATGT
GGAGAGCGA
UFO04805.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7031-RB | 2597 | CG7031-RB | 66..1185 | 9..1105 | 4965 | 97.5 | Plus |
| CG7031-RA | 1796 | CG7031-RA | 66..1185 | 9..1105 | 4965 | 97.5 | Plus |
| CG7031-RC | 2594 | CG7031-RC | 66..1182 | 9..1105 | 4910 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22804776..22805780 | 26..1022 | 4645 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:54:19 has no hits.
UFO04805.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:32:35 Download gff for
UFO04805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7031-RA | 58..1100 | 1..1032 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:19 Download gff for
UFO04805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7031-RA | 58..1100 | 1..1032 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:33:44 Download gff for
UFO04805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7031-RA | 58..1100 | 1..1032 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:44 Download gff for
UFO04805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22804777..22805793 | 27..1032 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:19 Download gff for
UFO04805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18630499..18631515 | 27..1032 | 98 | | Plus |
