UFO04806.5prime Sequence
1152 bp (1037 high quality bases) assembled on 2009-06-30
> UFO04806.5prime
CAGTCGACATGTGCTTTAGATATAGCTTCAGTTTCATAGTATTCGCGGCT
GTTCTGCTCCTGGCAGCCGGAATTCGTGCAGCTCCCTCGGATGTCGTCGT
GGAGAAGGCGGAGGAGCCCGCGGTGGCCAAACCCCTGCCTGATGCCAGTG
AGCTCACTGTTCCGGAGGACTGTCATCAGCCCAAGGAAACCGGTCGCTGT
TTCGCTCTGTTCTATCGCTACGCCTACAACGTGGATACACAATCCTGCGA
GGAGTTCGTTTACGGTGGATGTGCCGGCAACAAGAACAACTTCGAATCCA
AGGAGCAGTGCGAACAGGCATGTTTGGTAAAGTCTGCGGTTTCCTCCACG
GACTCAACAACCGAACAAAACAGCGAAGTGGCCACAGAAACTAGCACCTC
GTCTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCC
CTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAT
GGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGC
ACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAA
GAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCC
AGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAA
TAGGCCAGGTTTTCACCGTACACGCCACATCTTGCGAATATATGTGTAGA
ACTGCCGGAAATCGTCGTGTATTCACTCAGAGCGATGAAAACGTTTCAGT
TTGCTCATGGAAAACGTGTAACAGGGTGAACACTATCCATATCCACCAGC
TCACGTCTTTCATTGCATACGAAATTCGGATGAACATCATCAGGCGGCCA
GAAATGTTGTAATAGCCGATAACCTTGGCCTATTTTCTTTACGCTTTTAA
AA
UFO04806.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3604-RB | 631 | CG3604-RB | 97..497 | 4..404 | 1990 | 99.8 | Plus |
| CG3604-RA | 571 | CG3604-RA | 37..437 | 4..404 | 1990 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3697376..3697776 | 404..4 | 1990 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:35:15 has no hits.
UFO04806.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:32:36 Download gff for
UFO04806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3604-RA | 94..500 | 1..408 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:36 Download gff for
UFO04806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3604-RA | 34..440 | 1..408 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:05 Download gff for
UFO04806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3604-RA | 34..440 | 1..408 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:05 Download gff for
UFO04806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3697376..3697777 | 1..404 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:36 Download gff for
UFO04806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3697376..3697777 | 1..404 | 99 | | Minus |
