UFO04811.5prime Sequence
1046 bp (948 high quality bases) assembled on 2009-06-30
> UFO04811.5prime
CAGTCGACATGTTGTCACAGAATTTACGCCTCGTCCGGGGATTGCTTAAT
TACGGAGTTTGCCGCCCGAGCTTGAGAAACTTCGCAGCCGTTGGCGATAA
AAACAACGCAGCCGATAATGCTAATGCCAGCGATGTGGACGAACGCCACC
CGCTGCATGGTATCCGGATTTTGGACCTATCGCGCATCATCGCCGGCCCC
TATTGCACCATGGTTCTGGCGGATCTCGGCGCGGAAGTTATCAAGGTGGA
GCGTCCACACTTTGGCGATGAGGCGCGTAAGTGGGGACCACCCTTTCTAA
AGAACAGCAACGATGCCGCCTACTTCCTGGCTCCCAATCGCAATAAACGG
AGCATCTGCATCGATATCAAGCGCGGCACGCAACTCCTTCATCGCCTGGC
CGAGATTAGCGACGTGCTGGTGGAGAATTATGTGCCCGGCACCTTGGAGC
GTTACGGCCTGGGCTACGAGCAGTTGCGTAAGGTGAATCCCAAACTGATC
TATTGCTCAATGACGGGTTATGGCTCTGTGGGACCGTATGCCAAGCGACC
CGGCTACGATGTGATTGCCTCCTCGGTTGGAGGACTGATGCACATCACCG
GCGAGCGGGATGGACCGCCCAGCAAGGTGGGCGTGGCTGTGACGGATATG
TCCACAGGACTGTACGCCCATGGAGCAATTTTGGCAGCCCTCTATCAAAG
GACCCGCACGCAACGTGGCCAGAAGATCGAAGTCGACCTGTTGTCCACCT
GCTGCTCCCTGCTGCTCAACGTGGGTAGCAACTACCTGAATTCCGGGGTC
GAAGCAGGAAGGATGGGCACCGCACACTCCAGCATCGTTCCGTATCAGAG
CTTCAGACGAACGACGGCTATCTCACCCTGGCACTGGCAGTGATGTTCAG
TTTGTGACCTGTGTCGCCGCTAAAGTGACATTTGCGCAGATCCCAATTCA
GACACAGATCGTGTGACATCGAGGTGGAGCTGCTGGGCATCTAGAGCAAA
TGCTATCCGAGACCCTCGCGCCACTGATGAACCTTTCCAAGGGGCT
UFO04811.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-RA | 1582 | CG10877-RA | 98..1153 | 8..1043 | 4685 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20563055..20563970 | 920..8 | 4415 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:36:54 has no hits.
UFO04811.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:29 Download gff for
UFO04811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 98..1146 | 8..1036 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:42 Download gff for
UFO04811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 98..1146 | 8..1036 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:58 Download gff for
UFO04811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 98..1146 | 8..1036 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:58 Download gff for
UFO04811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20562922..20563970 | 8..1036 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:42 Download gff for
UFO04811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16388644..16389692 | 8..1036 | 97 | | Minus |
