UFO04815.5prime Sequence
1125 bp (1031 high quality bases) assembled on 2009-06-30
> UFO04815.5prime
CAGTCGACATGAGCAAGTTCACCATTTGCCTTCTCCTCGTCGTCCTGGCC
ATCGTGGCCATCCAGGCTGATGGCGATCGGCGTCCGTGTGTGGGTCGCTG
CACCGGTCTGTCCAGCGGCCAGAGTGTGTGCATCCGCAACAAGGTGACCA
ATGTGTGCACCCGCCTGCCGGCCTGTCGTCTGCGGGAGAAGAATTGCCGC
CGTCGGGACAATGGACTCGAACCCATTCGGGAGACATGCATCACCCGCTG
TCGCAACATTCCCGGCACCAGCGGCGTGGGCCAGTGCGCCATCAGGCTGC
GTCCTCGTCCCCAGTCCGATGGCAAGCGCATCAAGGAGTGCCAGAGGAGG
ATCTGCCTTGACGACAAGCTGGCCAGCTGCTGGAGGGACCAGCAGGGCGC
TTGCATCCTGCAGACCCGCTGCGAGGCCCAGAGGAGGAACTGCGTCCGGA
ATCCGCTTAACCAGTGGGTGAGGGCCAGCCAGTGGAGCTGCCAGGGCAAT
GTTGTGGGCGGTGGCATCCGACGCTGCCGCACCAGGCCCATCATCATCAA
GGACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCC
CTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAT
GGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGC
ACCTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAACGGGGCGAAGAA
GTGTCATATTGCCACGTTTAAATCAAACTGGTGAACTCACCCAGGATGCT
GAAACGAAAAACATATTCTCAATAATCCCTTTAGGAAATAGCAGCTTCAC
CGTAACCCGCCCCATCTTGCAATAATGTGTAGAACTGGCGGAATCGTCTG
TTATTCATCGAGCGGATGAAACAGT
UFO04815.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:52:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4151-RB | 1307 | CG4151-RB | 398..944 | 8..554 | 2735 | 100 | Plus |
| CG4151-RA | 758 | CG4151-RA | 61..607 | 8..554 | 2735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:52:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5501873..5502419 | 8..554 | 2735 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 21:52:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbif\P-element_M | 2935 | Dbif\P-element_M P_M 2935bp Derived from X60990. | 1751..1784 | 1047..1014 | 125 | 85.3 | Minus |
UFO04815.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:32:42 Download gff for
UFO04815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 42..598 | 8..565 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:02 Download gff for
UFO04815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 42..598 | 8..565 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:24 Download gff for
UFO04815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4151-RA | 61..617 | 8..565 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:24 Download gff for
UFO04815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5501873..5502419 | 8..554 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:02 Download gff for
UFO04815.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5395906..5396452 | 8..554 | 100 | == | Plus |
