UFO04816.5prime Sequence
1125 bp (1031 high quality bases) assembled on 2009-06-30
> UFO04816.5prime
CAGTCGACATGGCAAGACAGCGACTTCTCGGCTCGATCCTTTCCAAAGGC
GGAGCCCAAGTGCTGCGAAACTTCCAGTCATTTGTCCAGGGCACTCGTTT
GGAGTATGTCTCCTACACCTCGCCGCGCAATCAGATGCAGGCGCCACCAA
TTGTGGTGATGCACGACCTCAATCTGTCACTGGAATCCTGGCGCCAGGTA
GCTGTTAACCTCAGTCAGGTTGGATTGCGCCAGGTGATCACCGTGGATGC
TCGGAATCATGGCCTTAGTCCTTACATAACCGGGCATTCGCCAATGCACC
TGGCCGCCGACGTGGAGGCCCTGATGAGCCACCAGAGACTGAACAAGATC
GTTGCACTTGGACATGGAATGGGCGGTCGGGCAATGATGACACTGGCACT
CACTCAGCCGCAACTCGTCGAGCGGGTCATACTGGTGGACATCACACCAG
CACCGGTGCCCAGTAACTTCTATCTCACTCGGCAGGTGTTCGAGATGATG
CTCCAGGTGGCGCCCAGTATTCCCTCAAATCTATCACTTTCCGAGGGGCG
TACGTTCATCCTGCCACTGTTCCAGGATGTGGTCCACGACGCCTCCGAGC
TGCGTCGCATTATTTACAATCTGCGCAAGATGCAGGACAACACCTTTGGC
TGGGCAGTTAATCCCCAGGCGGTCCTAAGCTCCTGGGGGGAGATGATGAT
CAATTACGAGGCCACTTTGGGCGGACTGCGTCCCTACATGGGCGAAGTCT
TGCTCATAGCCGGTTCCCAGTCGGAATTCGTGACCACGACCAGTATTGCC
GTGATGCAGAGATACTTTCCAAATACAGTGGTACAGATTCTGGATGCTGG
ACACTGTGTGTATGAGGATCAGCCGGAACAATTTGTTGAACTAGTCGTGA
GTTTACTCAAACATGCTTAGTATGTGCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATATCATATCATAA
TCACAACTAGCCTAGGAAGATCCTGGTCATGACTATGCTGAATTCTCACA
ATAAAAACGCCCGGCGGCACGGAGCGTTCTGAACCAAATCAGAATGGAGT
CTGAGTCATACTGGAATCTATCACA
UFO04816.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14717-RB | 1819 | CG14717-RB | 137..1055 | 8..925 | 4570 | 99.9 | Plus |
| CG14717-RA | 1154 | CG14717-RA | 137..1055 | 8..925 | 4570 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11696645..11697563 | 8..925 | 4545 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:58:05 has no hits.
UFO04816.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:32:44 Download gff for
UFO04816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14717-RA | 137..1060 | 8..930 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:57:21 Download gff for
UFO04816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14717-RA | 137..1060 | 8..930 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:18 Download gff for
UFO04816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14717-RA | 137..1060 | 8..930 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:18 Download gff for
UFO04816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11696645..11697563 | 8..925 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:57:21 Download gff for
UFO04816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7522367..7523285 | 8..925 | 99 | == | Plus |
