UFO04818.5prime Sequence
1133 bp (1016 high quality bases) assembled on 2009-06-30
> UFO04818.5prime
CAGTCGACATGTTTAAGATTCTCATCGTCGCCCTGTCCCTTTGCACGGCC
GTCGTGCTGAGTGCTCCAGTGGACCACGTCACATCCACCACCCAGCCACC
GGTGGCCATTCTCGAATCATCTCACGAAAAGCACGAGGATGGATCGTACA
ACTTCTCTTACCTCGGCGAGGACGGCACCCACAGAAGGGAGGAGGCCGTG
GTCAGAAACCAAGGCACCGAGAACGAGTACCTGGAGATCAGCGGCTCCTA
CTCCTACTTCGATGCCAACGGACAGGAGGTGACCGTCACCTACAAGGCCG
ATGACCACGGATTTGTACCAGAGGGCGGAGCAATCCTGCCCCAGATTTCG
CTGGCCGCCAAGCAGGTCAGCGAGCAGGTGCCCCAACCAGATCTTGACTA
TGCTAAGCCTCCTAAGGTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATC
AAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA
GCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATC
GCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGT
GAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAAC
TGGTGAAACTCACCCAGGATTGGCTGAGACGAAAAACATATTCTCAATAA
ACCCTTTAGGGAAATAGGCCAGGTTTCACGTAACACGCCACATCTGCGAA
TATATGTGTAGAACTGCGGAAATCGTCGTGTATCCCTCAGAGCGATGAAA
ACGTTCAGTTGCTCATGGAAACGGTGTAACAAGGGTGAACACTATCCCAT
ATCACCAGCTCACGTCCTCCATGCATACGAATTCGATGACATCATCAGGC
GGGCAGATTGATAGGCGATAACTTGACTATTTC
UFO04818.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:49:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr78E-RA | 463 | CG7160-RA | 24..435 | 8..419 | 2060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:49:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21666480..21666878 | 419..21 | 1995 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:49:33 has no hits.
UFO04818.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:32:45 Download gff for
UFO04818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr78E-RA | 18..438 | 1..423 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:15 Download gff for
UFO04818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr78E-RA | 18..438 | 1..423 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:02 Download gff for
UFO04818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr78E-RA | 18..438 | 1..423 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:02 Download gff for
UFO04818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21666480..21666878 | 21..419 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:15 Download gff for
UFO04818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21659580..21659978 | 21..419 | 100 | <- | Minus |
