UFO04823.5prime Sequence
640 bp (397 high quality bases) assembled on 2009-06-30
> UFO04823.5prime
CAGTCGACATGTGTGACGAAGCGAATCCAGCGAAGCCGTGGCAGCTTCCC
GATGTGGTGTACGGCAATGGGATTCCGGCGCTGTGCCTGCTGCACCAGGA
GATCGAGCAGTTCTACAACTACATCCGGTCCACGCCAACAGAGTTCTGCT
TGCGGGCAGGTGCAGTGCGTCGCATCGAGGATGTGGTGCTTTCCATTTGG
CCAAGCGCATCCGTCGATCTCTTTGGCTCATTTCGGACCGGGCTAAATCT
GCCGGACTCGGACATTGATCTGGTTGTGTACTATAAAGTTCTGGGAACCC
CAGGCTGCTGGCATGAGCTTTCAAAACGAAACTAGTCAGCCCAGGAAATT
AACTGTGATTCCCGGGACACTTGTTGACCGGTCCCTCCACACAAGGGCTT
CTGTTGCCGGTTGGCCAAAGTTTTAACGGAACCTCCTTTTCCCCCCATCA
AGTTTCGAATGGGACCCTTCAACTCCCGAAACATCTCGGGGTTTCAGGCC
CCCCCAACCTGGTTAAAGGAATTTTTTCCCCCCTTTTTTCCCAAACTACC
CAAAAGGGGCGTAGGGGGGCTAAAGGAATTTCTTCCGCCCTCTTCCGGGA
TTTCAAAAAGGGTTTAAAACCCCGCGGGGAAAATTTTTTT
UFO04823.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Trf4-2-RB | 1429 | CG17462-RB | 146..478 | 9..346 | 1550 | 98.2 | Plus |
| Trf4-2-RA | 1870 | CG17462-RA | 356..688 | 9..346 | 1550 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24925571..24925903 | 9..346 | 1425 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:16:26 has no hits.
UFO04823.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:32:41 Download gff for
UFO04823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17462-RA | 261..566 | 1..310 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:19 Download gff for
UFO04823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trf4-2-RA | 350..655 | 1..310 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:17 Download gff for
UFO04823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trf4-2-RA | 350..655 | 1..310 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:17 Download gff for
UFO04823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24925565..24925870 | 1..310 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:19 Download gff for
UFO04823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20751287..20751592 | 1..310 | 98 | == | Plus |
