UFO04832.5prime Sequence
1078 bp (990 high quality bases) assembled on 2009-06-30
> UFO04832.5prime
CAGTCGACATGCGTTGCCAATTCGTTATCGCCTTTGGGCTTTTGGCCCTA
ATAGCAACTGCCTACGCCGATTCTCCACCTGCGGCAGGATCCCCACCCGC
GTCATCTCCACCGGCTGGAACCCCAACCTCGCCACCTCCAGCGACTGGAA
CACCGCCCTCACCATCCCCAGCGACTGGAACACCACCTTCAGCATCCCCA
GCTGCTGGTACACCGACCTCGCCAACTCCAGCGACTGGAACACCGTCCTC
GCCAGCTACTCCTGATGCGCCCGCTTCCTCGACATCACCAGCTACGCCCA
CATCGCCCAGTGACAGTGGATCCAGCAGCAGCCAGGAAGTGATTAGGCTC
AGGCGTCGGCTGCGCCGGCTGAGGCGTCAGCTCCGCCGCGAGAGGCGTCA
GGCCAACCAGAGTAATCAGAATGGAGGTGGTGGTCAGGGGCGAGTGGTTC
GCCGTGTACACCGTCACCGTCGTCTATTGGCAAGCTTTCTAGACCATTCG
TTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAA
TCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGAT
TCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCC
AGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGA
GCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGT
AATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATG
AACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATT
TGCCCATGGTGAAACGGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTT
AAATCAAACTGGTGAAACTCACCCACGGATTGGCTGAGACGAAAAACATA
TTTCTCAATAAACCCTTAGGAAATAGGCAGTTTTCACCGTACACGCCACA
TCTGCGAATATATGTGTAGACTGCGAAATCGTCTGTATACATCGAGCGAT
GAACGTTCAGTTGCCATGGACGGTTACA
UFO04832.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11300-RA | 581 | CG11300-RA | 35..505 | 9..479 | 2355 | 100 | Plus |
| CG11300-RA | 581 | CG11300-RA | 108..250 | 112..254 | 250 | 79.2 | Plus |
| CG11300-RA | 581 | CG11300-RA | 138..280 | 82..224 | 250 | 79.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23751949..23752419 | 9..479 | 2355 | 100 | Plus |
| 2R | 25286936 | 2R | 23752022..23752164 | 112..254 | 250 | 78.3 | Plus |
| 2R | 25286936 | 2R | 23752052..23752194 | 82..224 | 250 | 78.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:17:32 has no hits.
UFO04832.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:32 Download gff for
UFO04832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11300-RA | 2..483 | 6..487 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:02:49 Download gff for
UFO04832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11300-RA | 35..512 | 9..487 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:48:05 Download gff for
UFO04832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11300-RA | 35..512 | 9..487 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:48:05 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:02:49 has no hits.
