UFO04847.5prime Sequence
1074 bp (994 high quality bases) assembled on 2009-06-30
> UFO04847.5prime
CAGTCGACATGGCCACTTCCGGTTCGATCCTGTTCGCCATCTTCCTGCTG
AGCGCCACCCTCATTTCCGCCCAGCAGATCAAAGAGTCGGCGCCCAGTGC
GCGATTACTAGATCGATTCGATAACCGATATCCCGACGGCAGCTACGAGT
ATCGATTCGAGTTGGACGATGGAACCGCTCGCTATGAACGTGGATATTTC
GTTAAGATCAACGATGTAAAGACCCTGATGGTTGTGGGCTACTATGCCTA
TCGGATGACCGACGGGCGTTACATCACCGTCTTCTACAATGCCGATCAGT
TTGGCTATCGACAGAATCAGTCGATCACGCCGCAGGAATATCCCAATCTG
CCGCGTTCCATCGAGGTGCCCATGGTCAGCGAGGCATCTGCGGCATCCGC
GGCATCTGATGGCGTCTCCAGTTCCCAGTTCCAATCTCAGTTTCAATCCC
GTCTGGATGCCCATGGTAACCCCTCCATCACGACGACCACGCCCAGGGGG
GCGGGGACAAATCGTAGGGGCCGCTACGCAAGCTTTCTAGACCATTCGTT
TGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATC
ATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTC
TCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAG
ATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGC
TCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAA
TTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAA
CCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGC
CCATGGTGAAACGGGGCGAAGAAGTGTCCATATGCCACGTTTAAATCAAA
CTGTGAAACTCACCCAGGATGCTGAAACGAAAACATATCTCATAACCCTT
TAGATAGCAGTTCACGTACCGCCCAATCTGCCATTATTGTGTAGAACTGC
CGAATCGTCTGGATCATCGAGCGA
UFO04847.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr12A-RA | 858 | CG15757-RA | 132..650 | 9..527 | 2595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13543774..13544086 | 9..321 | 1565 | 100 | Plus |
| X | 23542271 | X | 13544494..13544699 | 322..527 | 1030 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:58:01 has no hits.
UFO04847.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:32:54 Download gff for
UFO04847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr12A-RA | 123..658 | 1..535 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:35 Download gff for
UFO04847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr12A-RA | 123..658 | 1..535 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:12 Download gff for
UFO04847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr12A-RA | 123..658 | 1..535 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:12 Download gff for
UFO04847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13543765..13544086 | 1..321 | 98 | -> | Plus |
| X | 13544494..13544699 | 322..527 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:35 Download gff for
UFO04847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13437798..13438119 | 1..321 | 98 | -> | Plus |
| arm_X | 13438527..13438732 | 322..527 | 100 | == | Plus |
