UFO04851.5prime Sequence
1153 bp (1039 high quality bases) assembled on 2009-06-30
> UFO04851.5prime
CAGTCGACATGACGCAGATGTCCGACGAACAGTTTCGCATATTCATAGAA
ACCATTAAATCGCTGGGGCCAATCAAAGAGGAACCGCCATCCAAGGGTAG
CTTTAGCAACTGCACGGTGAGATTCAGTGGCCAGCGGGATCACGATGCCG
TGGACGAGTTCATCAATGCCGTGGAGACGTATAAAGAGGTGGAGGGCATC
AGCGACAAAGATGCGCTAAAGGGTTTGCCGCTGCTCTTCAAGAGCATTGC
CGTGGTGTGGTGGAAGGGTGTGCGCCGGGATGCCAAGACCTGGTCGGATG
CCCTGCAGCTGCTGCGCGATCACTTCTCGCCCACTAAACCTTCCTACCAG
ATATACATGGAGATCTTCGAGACGAAGCAGTCCTACGACGAGGTGATCGA
CTCATTCATCTGCAAGCAGCGAGCGCTCCTAGCCAAGTTGCCGGAGGGAC
GACACGACGAGGAGACGGAGCTTGACTTCATCTACGGGCTGATGCAGCCC
AAGTACCGGGAGAGCATACCCCGACACGAGGTCAAAACCTTCCGGGAGCT
ACTCGATCGGGGGCGAACTGTGGAGCGCACAAGGCACGCAAGCTTTCTAG
ACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCAT
AATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGT
GCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGA
ACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGT
CCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGT
ACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACG
GCATGATGAACCTGAATCGCAGCGCATCAGCACCTTGTCGCTTGCGTATA
TATTTGCCATGTGAAACGGGGCGAAGAGTTGTCCATATTGCCACGTTTAA
TCAACCTGTGAAACTCACCCAGGATTGCCTGAAACGAAAACAATCTCCAT
AACCCTTAGGAAAGCAGCTTCACGTAACACGCCCATTCTGGCAAATATTG
TGAGAACTGCGGAATCGTCTGGATTACTCACAGTAACGTCCAGTTGCTCA
TGA
UFO04851.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Arc2-RA | 902 | CG13941-RA | 117..695 | 9..587 | 2850 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14362040..14362618 | 9..587 | 2850 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:55:01 has no hits.
UFO04851.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:33:03 Download gff for
UFO04851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arc2-RA | 90..682 | 1..595 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:52 Download gff for
UFO04851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arc2-RA | 110..702 | 1..595 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:34:12 Download gff for
UFO04851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arc2-RA | 110..702 | 1..595 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:34:12 Download gff for
UFO04851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14362033..14362631 | 1..600 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:52 Download gff for
UFO04851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10249538..10250136 | 1..600 | 97 | -> | Plus |
