UFO04856.5prime Sequence
1149 bp (1016 high quality bases) assembled on 2009-06-30
> UFO04856.5prime
CAGTCGACATGTTCTCGGACGACACCGATGAGTTGGACACCATCGCCGAT
GTGATGGGACTCCGGTCACAGGCGCGTCTCAATACGTTTCGCGAAATGTG
GTACCACGTCTTTCTGTGGGCCCTGTTCTCCTCCATATTCATTCACACCT
GCGCCGCCGTGGTGGCCTTCTTCACGCTCCGGAAGCACAAGTTCGGACGA
TTCTTCTCGATCCTCATCCTTGTCATGGGATTCCTTTCCCCGGCCTCCAG
TGGCATCATCAGCAGTGCAGTCATCGCCTTTGTGCATCGTGCCTCCAGTC
TGCCCATGTCGCCCATATACGCCATGATCTGGGGCCTCGGCCAGACCATC
GTCTCCGCCTGCCTGGGATTCACCCGGATTCTGGCCACGCTAGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACA
GGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATC
GCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCAC
AAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCT
TGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCAT
ATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTG
AGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTT
TCACCGTACACGCCACATCTTGCGAATATATGTGTAGAACTGCGGGAATC
GTCGTGTATTCACTCCAGAGCGATGAAAACGTTCAGTTTGCTCATGAAAC
GGGTGTAACAAGGGTGACACTATCCATATCACAGCTCCACGTCTTTTCAT
TGCATACGAATCGATGACATTCATCAGGCGGCAGAATGTGGATAAGCCCG
ATAACTTGGCTATTTCTTACGGCCTAAAGCGTTATATTCCCAGCTGGAC
UFO04856.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12341-RA | 1100 | CG12341-RA | 507..891 | 8..392 | 1880 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10812366..10812750 | 392..8 | 1880 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:35:29 has no hits.
UFO04856.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:33:05 Download gff for
UFO04856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12341-RA | 523..917 | 1..398 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:44 Download gff for
UFO04856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12341-RA | 503..897 | 1..398 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:13 Download gff for
UFO04856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12341-RA | 503..897 | 1..398 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:14:13 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:37:44 has no hits.
