UFO04858.5prime Sequence
1128 bp (1014 high quality bases) assembled on 2009-06-30
> UFO04858.5prime
CAGTCGACATGTGTGCATTTGCAACGCATTTGCTGAAGTGCGGGCGCCAC
GGTTTTCAAGTGGTTAATCCACCACGCGCTTCCGCTCTTCACTTAATACG
CGCTCTTCCGGCTCTCTTAAAAGGACCAAGGCGAAGAGAATTGGGGCGAT
GGTTTCTGCGCCGACAGCCTGCGCCTGAGTCCTTGGCCGCGGCGGCAGAA
GACCAAAGCAGCACAACCAGCAGCATCCGAGTGCGAAGCAACCAGCATCC
AAAACCGAATCCAAAACTCCGGCTCAGTGTGAATTTGCGACTCGAGAGCG
ACGGCGGCTCAAAGGAAACTTGGCTCGGAAAGTGTCTCGAGGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAG
GAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACA
AACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTT
GCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATA
TTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGA
GACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTT
CACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAT
CGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGA
AAACGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCTT
TCATTGCATACGAAATCGATGACATCATCAGGCGGGCAAGATGTGAATAA
GCGAAAAACTTGTGGCTTATTTTCTTACGCTTAAAGCCTAAATCATCGAA
CGCTGTAAGGTACTTGGACACTGACTGA
UFO04858.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42613-RG | 4961 | CG42613-RG | 51..383 | 9..341 | 1665 | 100 | Plus |
| CG42613-RE | 6672 | CG42613-RE | 51..383 | 9..341 | 1665 | 100 | Plus |
| CG42613-RH | 4927 | CG42613-RH | 51..383 | 9..341 | 1665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18929246..18929565 | 9..328 | 1600 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:16:41 has no hits.
UFO04858.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:31 Download gff for
UFO04858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42613-RH | 47..383 | 1..341 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:26 Download gff for
UFO04858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42613-RH | 47..383 | 1..341 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:26 Download gff for
UFO04858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18929242..18929565 | 1..328 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:31 Download gff for
UFO04858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14754964..14755287 | 1..328 | 98 | == | Plus |
