UFO04862.5prime Sequence
1091 bp (939 high quality bases) assembled on 2009-06-30
> UFO04862.5prime
CAGTCGACATGATCGCAGCGCTCGGGCTGATCTTCGGCATTCTAACGGCC
TTGGTGGTCGTGGCACTTAAGCTACTGGGCCTGAAGCCGCCACTAATCTT
CGGCAAGTACCCACTGAAAGGCATCTTTTACCGGGTGAAGTTCTGGATCG
CCCTGCTTGTCCTTCGCCGCCTGAGGTACCGCATCTACCGTCGGAACGAG
GAGCTGCTCGGCTCCGAGGAGCACCTGGCCAAGGTCGACAGGCCGCAGCA
GCTCAGCAACGACCCGAAGAGCTATGACGTGGTCAGCTTCATGGCGGCCA
ACAAGGAGGGCCAGAAACTAATGGTCACCTTGGAGCGAAGGAGGCGCGGA
GTCCTCAAGGCGGCACTGTACCTGTGGCTTCCCGAAAGCGGCCTGTTCAG
TTCGCCGAATCTGCCCGATATGGTATACTTCACCACCGCGGATGGAGCGG
AGAGCAACGCGTTCCAGGGTGGAGGCTTCCACGTCTACCAGGAGGCATCT
ATGCGTGTGTGGCGGCTCAAGTACTCCGGACTGCTGAAAACTCAAGGGCC
GGACGTGCAGGACGTACCCGTGGACTTGGACCTCCGTTTCGAAAGCTCCT
CCGCTGAGCACTTCGACTACAACAGAGATCTGAGCAGCGCCCTGATAGCC
GACTCCATAGCCAGAGAGGCCTGGAACGAAAAGTTCTACAGCCTGCTGCG
CAGCGTCTACCACATCGTAGAGAAGCGCACCCACTACGAACAGAACGGAG
AACTGGCCGGCCAGGTCACGCTCGATGGCAAGGAGCTGGCGCTGAAAATG
GTGGGCTTCCGGGACCACAGCTTCGGCACCGAGCGCTGCCTAAGCTCCAT
CAACCGGTACGTGTACTTTGCTCTCTTTATGGACGATGGCAGCAGCATGG
TGGTGGGCAGCCTCAGTCAGCCGTCTTCTCTGTCCTCCCTGACGGTGGCT
ACGTGTGCAGCCCGAGCGGCAGTATCAGCCGCTGACCGGCAGCACTGCAG
CTGTACTCGTACGGCGAAAGGACTCGCCCATCACAGACTTCATTGGTGGC
CACGGAGGACTGGAGTACTCTGCAATTCAGGGTGGAGGCCT
UFO04862.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3706-RA | 1545 | CG3706-RA | 112..1131 | 7..1019 | 4845 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 931345..932364 | 1019..7 | 4700 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:58:10 has no hits.
UFO04862.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:33:09 Download gff for
UFO04862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 304..1337 | 1..1028 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:41 Download gff for
UFO04862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 108..1141 | 1..1028 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:17 Download gff for
UFO04862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3706-RA | 108..1141 | 1..1028 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:17 Download gff for
UFO04862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 931313..932368 | 1..1039 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:41 Download gff for
UFO04862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 825346..826401 | 1..1039 | 97 | | Minus |
