UFO04883.5prime Sequence
1123 bp (997 high quality bases) assembled on 2009-06-30
> UFO04883.5prime
CAGTCGACATGGATACCAAGTCCAATGATGACTCGGCTGGCAGTGACTCG
CTGGACAAATCTATGCAAATCAAGTGTGTGATGGTGGAGACAACGACGAC
GGGCGACGGAGACTCCACAGTCGGAGATCTGGACAACTGCAGCAGGGATT
CCGCTGCGGAATCGATTAACAAGGAATCCGGTTCGATGGAGGGAGCCGGC
AAGCAGACGGATCACAAGACTGAAGCTGCGGCGGGGTCGTGCGGCGAGGG
CGACAGTCCGCAGAGCAGTCAATCCCCACCAGAACATCCGGCCAGCAAAT
CGCCCACATCTCCATGCACTGCCTTCGAGACGAAAGTCAAGCTTATATCA
CAGAACCTCAAGGAAACCACGCTGGCGGAGAGCACCGGCGCCTCCGTATC
AGCATCCACATCCACATCAACACCCACGTCCGCCTCTAGTAGCATCAGCG
GCAGCATGCTGGAGTCGCAGCAGACACCCAGCCAGTCCACCCCCGAAACA
ACAGATTCCGCCTCGTCGTCCGTGCGCGTGAAGAAGGTACGCTTCCATCC
GGACGTCAAGGAAAACGACGGCGGGAACTGGATGAAAAGAAAGCGACGCT
CCATGCATACCAAACGAACCTCCTCGCCCAGCGGCGCTAACTGTGATGGC
ATGGAGCTGGACGGTGAGTACGAGGACAACGATGACGATGAGCAGGAGGA
GGCGGAGGAGGAGTTCGATCTGGCCAAGACAATCGCCGAGGCGGAGGATT
ACCTCAAGCAGCACCCGTTGACATACGTGCAGCGCGTCGAACAGAACGGC
GAGCGGCTGCAGGATGGACTGCTCAGCATCGAGGATATGCTAAACGAAGT
CGGCGGAGGAGGTGGTCACCGAGTACAACGACGAGGACTTCTTCAGACGC
ATCAAGCCCGAGAATGGCATTGAACGCATTCTGGGCAAGAGACCACGGCG
GGAAAAGGTTGAATTCCTTTCTGCGCCTACGAGAAACAAAGGCGGGACTC
TTTCTGGGCAATCGGGAAGGAAGTTCATTCAAGCGCACGGTGCCCCCTCG
CTTTCTTCAAGGCGTACGAAAATGAATTCGAAGAAACGAACGTCAGCACG
CCTGATGCATCACCGTTGCCCAA
UFO04883.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| A16-RA | 1366 | CG9933-RA | 133..1226 | 7..1120 | 4915 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13020232..13021180 | 955..7 | 4635 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:23:29 has no hits.
UFO04883.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:32:22 Download gff for
UFO04883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| A16-RA | 123..1139 | 1..1028 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:02 Download gff for
UFO04883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| A16-RA | 128..1144 | 1..1028 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:48 Download gff for
UFO04883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| A16-RA | 128..1144 | 1..1028 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:48 Download gff for
UFO04883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13020231..13021185 | 1..957 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:02 Download gff for
UFO04883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13020231..13021185 | 1..957 | 99 | | Minus |
