UFO04905.5prime Sequence
1045 bp (987 high quality bases) assembled on 2009-06-30
> UFO04905.5prime
CAGTCGACATGTCCATGGATCTGATCAAGAGCAACGAAATGATGCAGAAC
ATGAGCGAAGCTGAACGAGAGGAGATCATTTTGTACCTACAACGGGTGAG
CTCTCGCTTGGCCACCGTGGAGCTGCGTGTGCGCACTGTTCGGGACAACT
CTCAGGAGGATTCCCTTAGCCAGATAAATGTATTGATTGACAGCATGATC
AAGATGGGTGATCCCGTGATCGGACGCCAACGATGCCAGTTTTACTTAAA
CGCCTGCTGCAGCAGCTCAATGGATCCATCCGGACACATGGACACCGTGC
CCGAGGCCGATGTTGGGCCGGTCGACAAGAAGTTCGAGAGCGTTTTGCTT
GGCTGCACTCTGGACGATCAGAAGAACATCAAGAAGCGGCTCCAGGCCTT
AATGGCTTATCTGAATAAGCAAACTGTTAGCCATGCAAGCTTTCTAGACC
ATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAAT
CATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCT
TGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACA
AATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCA
AGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACT
GTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCA
TGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATA
ATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCA
CGTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAA
CATATTCTCATAACCCTTTAGGGAAGTAGGCAGGTTTCACCGTACACGCC
ACATCTGCGATATATGTGTAGAAGCTGACGAATCGTCGTGTATTCACTCC
GAGGCGATGAAAACGTTTCAGTTGCTACATGAAGACGGGTGTACG
UFO04905.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:50:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7945-RA | 1451 | CG7945-RA | 915..1340 | 9..434 | 2130 | 100 | Plus |
| CG7945-RB | 1275 | CG7945-RB | 739..1164 | 9..434 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:50:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15521822..15522197 | 434..59 | 1880 | 100 | Minus |
| 3L | 28110227 | 3L | 15522360..15522411 | 60..9 | 260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:50:32 has no hits.
UFO04905.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:34:44 Download gff for
UFO04905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7945-RC | 1691..2121 | 9..442 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:52 Download gff for
UFO04905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7945-RB | 739..1169 | 9..442 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:28 Download gff for
UFO04905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7945-RB | 739..1169 | 9..442 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:28 Download gff for
UFO04905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15521822..15522195 | 61..434 | 100 | <- | Minus |
| 3L | 15522360..15522411 | 9..60 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:52 Download gff for
UFO04905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15514922..15515295 | 61..434 | 100 | <- | Minus |
| arm_3L | 15515460..15515511 | 9..60 | 100 | | Minus |
