UFO04907.5prime Sequence
1086 bp (1010 high quality bases) assembled on 2009-06-30
> UFO04907.5prime
CAGTCGACATGGGAAACACGGACTCCAAGTTGAACTTTCGCAAGGCGATT
GTGCAGCTGACGCAGAAGAACCAGAAGATCGACCCCAGCGACGAGCAGTT
CTGGGAGCAGTTCTGGCAGGGCCACCAGACGACGCTGGAGGATGTGTTCG
CGCTGGTCACCTCGAGCGAGATTCGCCAGATACGGAACGAGAATCCAGCC
AACCTGGCCACCTTATGCTACAAGGCGGTGGAAAAGCTTGCCCAGGCGGT
AGACAGCAGTTGTCGCACGCAGGCGGAGCAGCAGTGCGTTTTGAACTGCG
TGCGGCTGCTCGTCCGGTGTCTGCCGTACATTTTCGAGGACGAAAAGTGG
CGCGACTTCTTCTGGAGCAGCCTGCCATCGCAGGACAAGACCATGCCGTT
GGCTCAGTCACTGCTCAATGCCACCTGCGACCTTCTTTTCTGTCCCGACT
TCACGGTTACGGCCACGCGGCGTGCGGGCCCCGAGAAGGCCGAGGAGTTG
GCGAACATCGATAGCTGCGAGTACATTTGGGAAGCGGGCGTGGGTTTCGC
CCAGTCACCGCCCCACAACGCCCACATGGAGCGCAGGCGCACGGAGTTGC
TGAAGCTATTACTCACCTGCTTCTCGGAGCCCATGTACCGATCGCCGCAG
CAGTCCGAGGAGCCCAACAAGTGGATAGCATATTTCACCTCGGCCGACAA
TCGCCATGCCCTGCCGCTGTTCACCTCGTTTCTGAACACCGTGTGCTCCT
ACGATCCGGTGGGCTTCGGCGTGCCCTACAATCACCTGCTGTTTGCAGAC
ACCACAGAGCCCCTGGTGGAAGCGTGCCTTCAACTGCTCATTGTCACCTT
GGATCACGATATGGTGGTGCAGCAGCAACTCACACAACCCGGACAGGCGT
CCTACGACGAGGGCAATTGCGGCGACAACTTGTTCATTAACTATCTTTCG
AGGGTTCACGCCAGTCTGAGACTGACTGCATGTCAGTTCAGTTGAGAATG
TGACTGCTCTGACGCGAATTCGATGACGTGCTGACGCTCGACCGTGCCTG
AAATCGACCGCGCGCGCGCGCCCGCTCCTGCTACGA
UFO04907.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8841-RB | 3539 | CG8841-RB | 216..1166 | 9..959 | 4755 | 100 | Plus |
| CG8841-RA | 3460 | CG8841-RA | 137..1087 | 9..959 | 4755 | 100 | Plus |
| CG8841-RC | 3530 | CG8841-RC | 207..1157 | 9..959 | 4755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12324950..12325900 | 959..9 | 4755 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:24:24 has no hits.
UFO04907.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:14:47 Download gff for
UFO04907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8841-RB | 193..1143 | 9..959 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:31 Download gff for
UFO04907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8841-RC | 207..1157 | 9..959 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:15 Download gff for
UFO04907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8841-RC | 207..1157 | 9..959 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:15 Download gff for
UFO04907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12324939..12325900 | 9..971 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:31 Download gff for
UFO04907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8212444..8213405 | 9..971 | 99 | | Minus |
