UFO04914.5prime Sequence
1153 bp (1052 high quality bases) assembled on 2009-06-30
> UFO04914.5prime
CAGTCGACATGCTGAGATCGTCGGTGCCCGTGCAGCTGACAAAACTGCGA
AATAGCGCCGAGGCCGTGGCGTCCATTGCCCGCGAAAAGGGATCCCAAGG
TGGCCAAGGACAAAAGCAACAGGTGGACAAAGAGCTATCCACCATCATGG
ATGACTTGCAGCGGGATTACGGGAATTACAAGTACACGGTATACCGGTGC
GCCAGTAAATTTGTGGCGCTGCAAAAGATATTTCACACTGGAAAAATCCC
CTACAAGCTGGTTTTGGCCATTTTGGATCGCCATAACTTGAGTGGTGGCC
TGGAACTGATGGTTCCTCCATTCCAGTTGACCTCCCTGCTGCACGATGTA
TACTTTGCCTGCGAGAAACTAGGCCATTTCAACCAGGATGCGAACTATAA
ACTGGACAGGGCAACCGGGCTGTTGGCCAACTTCTTCTGGAATGTCTACG
ATCCGCAACGCAGACACTCCATATCCCTGTTAGAGATCAGGATCACCTTC
ATACTGCTGTGCAAGCTATATAGCAGCGATCACCTGGTGGGCGACATCTT
TGGCCTGCTGGCCGATCCCAAGTCGCAGATCATCTCCAGATATGCATTCG
AACAGCTCCTAGCCACGCTGAGCAAGTTACTCAGCTATTTGGGCGAGGCC
AAGGCCTATGGCGTCCACAATCTTCCGTTGGCTATGGAGCAGTGCTTTGC
CCGCTGTCCGCATGGCGTTGGTGGACTGACCGAGCCGCAGTTCCACAAAC
TCTGGACGGGAGCGGGTGTCCAGACGAGATTCCTGATCTATGGCAATCTG
CTGGCACTGGTGAAACGCATCGAGGACACCGAGCATTTGATTCACAGTAA
TTCTTGTGCCGGCTGCCGCAAGGAGCACATTGTGGGCATACGTTTCCGGT
GTCAGTTGTGTAGGGATATATCGTTGTGCCTGCCCTGCTTTGCAGTGGCT
TCGCTGGTGGTCGCCACGAGCCGGGTCATCGGATGTGCGAGGTTTTCGTG
AGGATCAGCCGCCATTGCGTTGGACCCGCCACCTGACAGGCTGTGCGCTG
CTGGTGATGCCGCGCAAAACAAGGAGGGAGGAGCGTCCCGGCCTTCTGTA
TGGCCAGGGAAGGTGGTCGCCTTGGGTCATTCCCCTCCCACGCCCATTTC
CCG
UFO04914.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dah-RA | 2353 | CG6157-RA | 103..1248 | 9..1148 | 5280 | 97.9 | Plus |
| dah-RB | 2344 | CG6157-RB | 103..1239 | 9..1148 | 5135 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15329010..15329709 | 455..1148 | 2860 | 95.9 | Plus |
| X | 23542271 | X | 15328444..15328672 | 9..237 | 1145 | 100 | Plus |
| X | 23542271 | X | 15328736..15328953 | 238..455 | 1090 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:17:02 has no hits.
UFO04914.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:34:15 Download gff for
UFO04914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dah-RA | 91..1248 | 1..1153 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:02:28 Download gff for
UFO04914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dah-RA | 95..1252 | 1..1153 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:45 Download gff for
UFO04914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dah-RA | 95..1252 | 1..1153 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:45 Download gff for
UFO04914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15328436..15328672 | 1..237 | 98 | -> | Plus |
| X | 15328736..15328952 | 238..454 | 100 | -> | Plus |
| X | 15329010..15329713 | 455..1153 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:02:28 Download gff for
UFO04914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15222469..15222705 | 1..237 | 98 | -> | Plus |
| arm_X | 15222769..15222985 | 238..454 | 100 | -> | Plus |
| arm_X | 15223043..15223746 | 455..1153 | 96 | | Plus |
