UFO04916.5prime Sequence
1123 bp (1014 high quality bases) assembled on 2009-06-30
> UFO04916.5prime
CAGTCGACATGCTTACCGGCCGTCCAGTGAGAATGTCCGTTGCAGTAAAC
CAAAAAGGCTGGGGTAAGAAGGCAGGAGCTTCCGTATCCGACTCCGCAAT
TCGTACACAGTCCGCCCTCAGCGAGGGGGGTGGGGCCATTGACGTCCGGC
CGATGGAGCACGACGAGGAAATCAATCGCGAAGATCTCAACCTCGACGAG
GACGATGAGATGGAGGAGGAGGAGGAGGAGGAGCACGCCGACGAAGAGGA
CGATGACGAGGAGCCGGATAGCAACGAGAACAGCGCACCGGAGGAGCAAG
TAGAGCCGCCGGCCTTCAGCCTAGCGACGCTGGGACTCCAACGCGTGGGC
AGCGCACCGCCGCCCAAGCCCAAAGTCCAGAAGGCCCCAATCCCGACCCT
AAATGCCCGTGGAATGCCTGCTCGGATACGAAAGAGAAATCGTCTCTTTT
ATGACGAGAACATCATCAACGATGACAAGCCGCTGCGCATGAGCTTGGCA
CCCAAGAAGACGCCTGGCAGACCACCGCAGTCTGCCGGCGGTGGCTCTAG
CCAGAAGATCCCGCTTACCCCGTCTAAGGTGCTGAAGAAGCGCAAGGGAG
TGGTCTCCCGCTACATGCGTTCCAGTGAGCAGGGAACCAACTCCGTTTCG
GCCAGCAATCAGCCCCAGCTGTTGGGCAAGCACAAGAAGGCGACGCCATC
GAAGAGCCAGTCGGTGGGCAGCAAGCTGGGCTCCGGTGGACCGAAAACAG
GGCGGGGTGCCCATTTCATTGGAAAGGGTACCGCTGCAGCGGTGGCTGCA
GTAGCAGCCGCCGAGGAGGAAGCTAACCAGGCTGATGCTGCAGCGCTGGC
GAACAAGCGGTTGGGCCAGTCCCATTGGTCTTCGGCTGCGCAATCTGCTC
AGTTGCCCAAAGCGCACAAGTGGGCCATAGCCGGAGTGGTTCTACTCGTA
CGTTGACACCGCTATCGAATGCCGGGATGAGTTATGACCATGTGAATGAA
CTGGCACCAGCTTGGCCATCCGAACCCCATTCCCCACGAGTGGGGTGATA
TTAGCGTATGAATGGGCAGGCCGCGGCCAGGCTCCCCCAATTTTCCGCGA
GAACGCAAGAAGTGAACCGGAAG
UFO04916.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mip130-RA | 3459 | CG3480-RA | 115..1228 | 9..1113 | 4915 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1916976..1918065 | 11..1094 | 4670 | 96.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:23:46 has no hits.
UFO04916.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:34:17 Download gff for
UFO04916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mip130-RA | 111..1114 | 9..1008 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:12 Download gff for
UFO04916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mip130-RA | 141..1144 | 9..1008 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:57 Download gff for
UFO04916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mip130-RA | 115..1118 | 9..1008 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:57 Download gff for
UFO04916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1916974..1917977 | 8..1008 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:12 Download gff for
UFO04916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1811007..1812010 | 8..1008 | 98 | == | Plus |
